Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC26.12■■□□□ 1.77
CHMP4BQ9H444 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC26.12■■□□□ 1.77
CHMP4BQ9H444 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC26.12■■□□□ 1.77
CHMP4BQ9H444 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CHMP4BQ9H444 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
CHMP4BQ9H444 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CHMP4BQ9H444 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CHMP4BQ9H444 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CHMP4BQ9H444 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CHMP4BQ9H444 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
CHMP4BQ9H444 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
CHMP4BQ9H444 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC26.11■■□□□ 1.77
CHMP4BQ9H444 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC26.11■■□□□ 1.77
CHMP4BQ9H444 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CHMP4BQ9H444 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC26.11■■□□□ 1.77
CHMP4BQ9H444 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC26.11■■□□□ 1.77
CHMP4BQ9H444 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC26.11■■□□□ 1.77
CHMP4BQ9H444 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CHMP4BQ9H444 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC26.1■■□□□ 1.77
CHMP4BQ9H444 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
CHMP4BQ9H444 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CHMP4BQ9H444 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CHMP4BQ9H444 PLD4-205ENST00000553861 667 ntTSL 2 BASIC26.1■■□□□ 1.77
CHMP4BQ9H444 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC26.1■■□□□ 1.77
CHMP4BQ9H444 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CHMP4BQ9H444 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
CHMP4BQ9H444 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CHMP4BQ9H444 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CHMP4BQ9H444 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CHMP4BQ9H444 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CHMP4BQ9H444 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
CHMP4BQ9H444 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CHMP4BQ9H444 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CHMP4BQ9H444 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CHMP4BQ9H444 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC26.09■■□□□ 1.77
CHMP4BQ9H444 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CHMP4BQ9H444 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC26.09■■□□□ 1.77
CHMP4BQ9H444 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
CHMP4BQ9H444 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CHMP4BQ9H444 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC26.09■■□□□ 1.77
CHMP4BQ9H444 NTF6G-201ENST00000591094 616 ntBASIC26.09■■□□□ 1.77
CHMP4BQ9H444 TFG-210ENST00000620299 1289 ntTSL 5 BASIC26.09■■□□□ 1.77
CHMP4BQ9H444 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CHMP4BQ9H444 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC26.09■■□□□ 1.77
CHMP4BQ9H444 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
CHMP4BQ9H444 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CHMP4BQ9H444 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC26.09■■□□□ 1.77
CHMP4BQ9H444 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
CHMP4BQ9H444 AC116050.2-201ENST00000612102 1779 ntBASIC26.08■■□□□ 1.77
CHMP4BQ9H444 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CHMP4BQ9H444 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CHMP4BQ9H444 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CHMP4BQ9H444 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CHMP4BQ9H444 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
CHMP4BQ9H444 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC26.08■■□□□ 1.77
CHMP4BQ9H444 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC26.08■■□□□ 1.77
CHMP4BQ9H444 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CHMP4BQ9H444 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
CHMP4BQ9H444 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.76
CHMP4BQ9H444 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.76
CHMP4BQ9H444 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CHMP4BQ9H444 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
CHMP4BQ9H444 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC26.07■■□□□ 1.76
CHMP4BQ9H444 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CHMP4BQ9H444 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
CHMP4BQ9H444 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
CHMP4BQ9H444 AC019069.1-201ENST00000610008 1333 ntBASIC26.07■■□□□ 1.76
CHMP4BQ9H444 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CHMP4BQ9H444 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CHMP4BQ9H444 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CHMP4BQ9H444 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC26.06■■□□□ 1.76
CHMP4BQ9H444 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CHMP4BQ9H444 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CHMP4BQ9H444 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC26.06■■□□□ 1.76
CHMP4BQ9H444 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC26.06■■□□□ 1.76
CHMP4BQ9H444 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC26.06■■□□□ 1.76
CHMP4BQ9H444 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC26.06■■□□□ 1.76
CHMP4BQ9H444 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CHMP4BQ9H444 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CHMP4BQ9H444 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
CHMP4BQ9H444 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CHMP4BQ9H444 STAC-204ENST00000457375 1366 ntTSL 2 BASIC26.06■■□□□ 1.76
CHMP4BQ9H444 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC26.06■■□□□ 1.76
CHMP4BQ9H444 RBM17P2-201ENST00000616397 1405 ntBASIC26.05■■□□□ 1.76
CHMP4BQ9H444 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CHMP4BQ9H444 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CHMP4BQ9H444 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
CHMP4BQ9H444 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC26.05■■□□□ 1.76
CHMP4BQ9H444 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CHMP4BQ9H444 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
CHMP4BQ9H444 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CHMP4BQ9H444 PTPA-214ENST00000423100 988 ntTSL 2 BASIC26.05■■□□□ 1.76
CHMP4BQ9H444 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC26.05■■□□□ 1.76
CHMP4BQ9H444 KRT18P11-201ENST00000435214 1283 ntBASIC26.05■■□□□ 1.76
CHMP4BQ9H444 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC26.05■■□□□ 1.76
CHMP4BQ9H444 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CHMP4BQ9H444 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
CHMP4BQ9H444 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC26.04■■□□□ 1.76
CHMP4BQ9H444 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC26.04■■□□□ 1.76
CHMP4BQ9H444 CD44-222ENST00000526025 1052 ntTSL 2 BASIC26.04■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms