Protein–RNA interactions for Protein: Q9BY41

HDAC8, Histone deacetylase 8, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8Q9BY41 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
HDAC8Q9BY41 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.7■□□□□ 0.9
HDAC8Q9BY41 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.7■□□□□ 0.9
HDAC8Q9BY41 AL589743.5-201ENST00000616611 1050 ntBASIC20.7■□□□□ 0.9
HDAC8Q9BY41 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HDAC8Q9BY41 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HDAC8Q9BY41 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HDAC8Q9BY41 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.69■□□□□ 0.9
HDAC8Q9BY41 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.69■□□□□ 0.9
HDAC8Q9BY41 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HDAC8Q9BY41 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
HDAC8Q9BY41 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HDAC8Q9BY41 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.69■□□□□ 0.9
HDAC8Q9BY41 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.69■□□□□ 0.9
HDAC8Q9BY41 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.69■□□□□ 0.9
HDAC8Q9BY41 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.69■□□□□ 0.9
HDAC8Q9BY41 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.69■□□□□ 0.9
HDAC8Q9BY41 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HDAC8Q9BY41 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HDAC8Q9BY41 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HDAC8Q9BY41 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.69■□□□□ 0.9
HDAC8Q9BY41 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.69■□□□□ 0.9
HDAC8Q9BY41 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HDAC8Q9BY41 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HDAC8Q9BY41 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.69■□□□□ 0.9
HDAC8Q9BY41 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
HDAC8Q9BY41 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.68■□□□□ 0.9
HDAC8Q9BY41 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HDAC8Q9BY41 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HDAC8Q9BY41 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
HDAC8Q9BY41 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HDAC8Q9BY41 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.68■□□□□ 0.9
HDAC8Q9BY41 TSPY20P-201ENST00000450910 630 ntBASIC20.68■□□□□ 0.9
HDAC8Q9BY41 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.68■□□□□ 0.9
HDAC8Q9BY41 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.68■□□□□ 0.9
HDAC8Q9BY41 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.68■□□□□ 0.9
HDAC8Q9BY41 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.68■□□□□ 0.9
HDAC8Q9BY41 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.68■□□□□ 0.9
HDAC8Q9BY41 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HDAC8Q9BY41 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HDAC8Q9BY41 CYP21A1P-202ENST00000354927 1481 ntBASIC20.68■□□□□ 0.9
HDAC8Q9BY41 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
HDAC8Q9BY41 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HDAC8Q9BY41 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
HDAC8Q9BY41 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HDAC8Q9BY41 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HDAC8Q9BY41 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HDAC8Q9BY41 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HDAC8Q9BY41 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HDAC8Q9BY41 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
HDAC8Q9BY41 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HDAC8Q9BY41 RNA5SP413-201ENST00000516373 109 ntBASIC20.67■□□□□ 0.9
HDAC8Q9BY41 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.67■□□□□ 0.9
HDAC8Q9BY41 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HDAC8Q9BY41 MIR4651-201ENST00000582622 73 ntBASIC20.67■□□□□ 0.9
HDAC8Q9BY41 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
HDAC8Q9BY41 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
HDAC8Q9BY41 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
HDAC8Q9BY41 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
HDAC8Q9BY41 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HDAC8Q9BY41 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HDAC8Q9BY41 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
HDAC8Q9BY41 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.67■□□□□ 0.9
HDAC8Q9BY41 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.67■□□□□ 0.9
HDAC8Q9BY41 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HDAC8Q9BY41 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HDAC8Q9BY41 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HDAC8Q9BY41 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.66■□□□□ 0.9
HDAC8Q9BY41 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.66■□□□□ 0.9
HDAC8Q9BY41 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.66■□□□□ 0.9
HDAC8Q9BY41 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HDAC8Q9BY41 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.66■□□□□ 0.9
HDAC8Q9BY41 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
HDAC8Q9BY41 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.66■□□□□ 0.9
HDAC8Q9BY41 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.66■□□□□ 0.9
HDAC8Q9BY41 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HDAC8Q9BY41 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HDAC8Q9BY41 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
HDAC8Q9BY41 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
HDAC8Q9BY41 FBXW4P1-201ENST00000426721 2239 ntBASIC20.65■□□□□ 0.9
HDAC8Q9BY41 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HDAC8Q9BY41 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HDAC8Q9BY41 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
HDAC8Q9BY41 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HDAC8Q9BY41 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HDAC8Q9BY41 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HDAC8Q9BY41 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.65■□□□□ 0.9
HDAC8Q9BY41 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HDAC8Q9BY41 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HDAC8Q9BY41 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.65■□□□□ 0.9
HDAC8Q9BY41 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
HDAC8Q9BY41 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HDAC8Q9BY41 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.65■□□□□ 0.9
HDAC8Q9BY41 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HDAC8Q9BY41 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
HDAC8Q9BY41 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HDAC8Q9BY41 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HDAC8Q9BY41 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HDAC8Q9BY41 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.65■□□□□ 0.9
HDAC8Q9BY41 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms