Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSBP3Q9BWW4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSBP3Q9BWW4 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSBP3Q9BWW4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SSBP3Q9BWW4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSBP3Q9BWW4 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSBP3Q9BWW4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SSBP3Q9BWW4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SSBP3Q9BWW4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SSBP3Q9BWW4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
SSBP3Q9BWW4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.28■□□□□ 0.36
SSBP3Q9BWW4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSBP3Q9BWW4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.28■□□□□ 0.36
SSBP3Q9BWW4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SSBP3Q9BWW4 TSPY6P-201ENST00000448518 926 ntBASIC17.28■□□□□ 0.36
SSBP3Q9BWW4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.28■□□□□ 0.36
SSBP3Q9BWW4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.28■□□□□ 0.36
SSBP3Q9BWW4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SSBP3Q9BWW4 OR10C1-204ENST00000622521 1039 ntBASIC17.28■□□□□ 0.36
SSBP3Q9BWW4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.28■□□□□ 0.36
SSBP3Q9BWW4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SSBP3Q9BWW4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SSBP3Q9BWW4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.28■□□□□ 0.36
SSBP3Q9BWW4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.28■□□□□ 0.36
SSBP3Q9BWW4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SSBP3Q9BWW4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSBP3Q9BWW4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SSBP3Q9BWW4 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SSBP3Q9BWW4 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SSBP3Q9BWW4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
SSBP3Q9BWW4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SSBP3Q9BWW4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.27■□□□□ 0.36
SSBP3Q9BWW4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SSBP3Q9BWW4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.27■□□□□ 0.36
SSBP3Q9BWW4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
SSBP3Q9BWW4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.27■□□□□ 0.36
SSBP3Q9BWW4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.27■□□□□ 0.36
SSBP3Q9BWW4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.27■□□□□ 0.35
SSBP3Q9BWW4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
SSBP3Q9BWW4 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
SSBP3Q9BWW4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
SSBP3Q9BWW4 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.27■□□□□ 0.35
SSBP3Q9BWW4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SSBP3Q9BWW4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSBP3Q9BWW4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSBP3Q9BWW4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSBP3Q9BWW4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSBP3Q9BWW4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
SSBP3Q9BWW4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SSBP3Q9BWW4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SSBP3Q9BWW4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSBP3Q9BWW4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSBP3Q9BWW4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.26■□□□□ 0.35
SSBP3Q9BWW4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SSBP3Q9BWW4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SSBP3Q9BWW4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.26■□□□□ 0.35
SSBP3Q9BWW4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.26■□□□□ 0.35
SSBP3Q9BWW4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.26■□□□□ 0.35
SSBP3Q9BWW4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SSBP3Q9BWW4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSBP3Q9BWW4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SSBP3Q9BWW4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSBP3Q9BWW4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSBP3Q9BWW4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.26■□□□□ 0.35
SSBP3Q9BWW4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
SSBP3Q9BWW4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSBP3Q9BWW4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSBP3Q9BWW4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.26■□□□□ 0.35
SSBP3Q9BWW4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SSBP3Q9BWW4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SSBP3Q9BWW4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSBP3Q9BWW4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SSBP3Q9BWW4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.25■□□□□ 0.35
SSBP3Q9BWW4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.25■□□□□ 0.35
SSBP3Q9BWW4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSBP3Q9BWW4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SSBP3Q9BWW4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.25■□□□□ 0.35
SSBP3Q9BWW4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SSBP3Q9BWW4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SSBP3Q9BWW4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SSBP3Q9BWW4 CDV3P1-201ENST00000471403 739 ntBASIC17.25■□□□□ 0.35
SSBP3Q9BWW4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SSBP3Q9BWW4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
SSBP3Q9BWW4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SSBP3Q9BWW4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.25■□□□□ 0.35
SSBP3Q9BWW4 MKRN4P-201ENST00000444706 1521 ntBASIC17.25■□□□□ 0.35
SSBP3Q9BWW4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SSBP3Q9BWW4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSBP3Q9BWW4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SSBP3Q9BWW4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.24■□□□□ 0.35
SSBP3Q9BWW4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSBP3Q9BWW4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SSBP3Q9BWW4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSBP3Q9BWW4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSBP3Q9BWW4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSBP3Q9BWW4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSBP3Q9BWW4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSBP3Q9BWW4 GUSBP6-202ENST00000438529 1198 ntBASIC17.24■□□□□ 0.35
SSBP3Q9BWW4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.24■□□□□ 0.35
SSBP3Q9BWW4 AC016405.3-201ENST00000607710 860 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms