Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC21■□□□□ 0.95
LRFN3Q9BTN0 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
LRFN3Q9BTN0 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21■□□□□ 0.95
LRFN3Q9BTN0 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
LRFN3Q9BTN0 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
LRFN3Q9BTN0 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.99■□□□□ 0.95
LRFN3Q9BTN0 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.99■□□□□ 0.95
LRFN3Q9BTN0 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRFN3Q9BTN0 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRFN3Q9BTN0 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRFN3Q9BTN0 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
LRFN3Q9BTN0 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
LRFN3Q9BTN0 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.99■□□□□ 0.95
LRFN3Q9BTN0 NUDT16P1-203ENST00000513809 620 ntBASIC20.99■□□□□ 0.95
LRFN3Q9BTN0 AC022616.7-201ENST00000525383 220 ntBASIC20.99■□□□□ 0.95
LRFN3Q9BTN0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.99■□□□□ 0.95
LRFN3Q9BTN0 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.99■□□□□ 0.95
LRFN3Q9BTN0 LINC01238-205ENST00000567549 1107 ntBASIC20.99■□□□□ 0.95
LRFN3Q9BTN0 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.99■□□□□ 0.95
LRFN3Q9BTN0 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.99■□□□□ 0.95
LRFN3Q9BTN0 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.99■□□□□ 0.95
LRFN3Q9BTN0 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRFN3Q9BTN0 AC027702.1-201ENST00000563810 1770 ntBASIC20.99■□□□□ 0.95
LRFN3Q9BTN0 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
LRFN3Q9BTN0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRFN3Q9BTN0 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRFN3Q9BTN0 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LRFN3Q9BTN0 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LRFN3Q9BTN0 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRFN3Q9BTN0 ATP5G1P1-201ENST00000448724 379 ntBASIC20.98■□□□□ 0.95
LRFN3Q9BTN0 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.98■□□□□ 0.95
LRFN3Q9BTN0 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.98■□□□□ 0.95
LRFN3Q9BTN0 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.98■□□□□ 0.95
LRFN3Q9BTN0 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.98■□□□□ 0.95
LRFN3Q9BTN0 AL121906.2-201ENST00000621597 723 ntBASIC20.98■□□□□ 0.95
LRFN3Q9BTN0 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.98■□□□□ 0.95
LRFN3Q9BTN0 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.98■□□□□ 0.95
LRFN3Q9BTN0 AP000550.4-202ENST00000639755 178 ntBASIC20.98■□□□□ 0.95
LRFN3Q9BTN0 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LRFN3Q9BTN0 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.98■□□□□ 0.95
LRFN3Q9BTN0 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LRFN3Q9BTN0 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.98■□□□□ 0.95
LRFN3Q9BTN0 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRFN3Q9BTN0 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.97■□□□□ 0.95
LRFN3Q9BTN0 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
LRFN3Q9BTN0 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.97■□□□□ 0.95
LRFN3Q9BTN0 AL353807.1-201ENST00000427475 662 ntBASIC20.97■□□□□ 0.95
LRFN3Q9BTN0 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LRFN3Q9BTN0 FITM1-202ENST00000559294 800 ntBASIC20.97■□□□□ 0.95
LRFN3Q9BTN0 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
LRFN3Q9BTN0 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRFN3Q9BTN0 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.97■□□□□ 0.95
LRFN3Q9BTN0 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LRFN3Q9BTN0 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LRFN3Q9BTN0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.96■□□□□ 0.95
LRFN3Q9BTN0 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRFN3Q9BTN0 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.96■□□□□ 0.95
LRFN3Q9BTN0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRFN3Q9BTN0 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LRFN3Q9BTN0 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRFN3Q9BTN0 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.96■□□□□ 0.95
LRFN3Q9BTN0 AK4P3-201ENST00000418260 669 ntBASIC20.96■□□□□ 0.95
LRFN3Q9BTN0 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.96■□□□□ 0.95
LRFN3Q9BTN0 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.96■□□□□ 0.95
LRFN3Q9BTN0 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.96■□□□□ 0.95
LRFN3Q9BTN0 AL691432.3-201ENST00000621860 400 ntBASIC20.96■□□□□ 0.95
LRFN3Q9BTN0 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.96■□□□□ 0.95
LRFN3Q9BTN0 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.96■□□□□ 0.95
LRFN3Q9BTN0 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRFN3Q9BTN0 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRFN3Q9BTN0 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
LRFN3Q9BTN0 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRFN3Q9BTN0 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRFN3Q9BTN0 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRFN3Q9BTN0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LRFN3Q9BTN0 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRFN3Q9BTN0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRFN3Q9BTN0 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRFN3Q9BTN0 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRFN3Q9BTN0 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.95■□□□□ 0.94
LRFN3Q9BTN0 AC063952.2-201ENST00000498792 1227 ntBASIC20.95■□□□□ 0.94
LRFN3Q9BTN0 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.95■□□□□ 0.94
LRFN3Q9BTN0 AC073195.1-201ENST00000607241 877 ntBASIC20.95■□□□□ 0.94
LRFN3Q9BTN0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.95■□□□□ 0.94
LRFN3Q9BTN0 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRFN3Q9BTN0 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.95■□□□□ 0.94
LRFN3Q9BTN0 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.94■□□□□ 0.94
LRFN3Q9BTN0 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LRFN3Q9BTN0 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LRFN3Q9BTN0 AL031133.1-201ENST00000406807 723 ntBASIC20.94■□□□□ 0.94
LRFN3Q9BTN0 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRFN3Q9BTN0 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.94■□□□□ 0.94
LRFN3Q9BTN0 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.94■□□□□ 0.94
LRFN3Q9BTN0 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LRFN3Q9BTN0 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LRFN3Q9BTN0 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRFN3Q9BTN0 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRFN3Q9BTN0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRFN3Q9BTN0 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LRFN3Q9BTN0 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms