Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PCGF1Q9BSM1 KRT18P20-201ENST00000548986 1279 ntBASIC17.33■□□□□ 0.36
PCGF1Q9BSM1 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.33■□□□□ 0.36
PCGF1Q9BSM1 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.33■□□□□ 0.36
PCGF1Q9BSM1 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.33■□□□□ 0.36
PCGF1Q9BSM1 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCGF1Q9BSM1 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.33■□□□□ 0.36
PCGF1Q9BSM1 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCGF1Q9BSM1 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCGF1Q9BSM1 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCGF1Q9BSM1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCGF1Q9BSM1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.33■□□□□ 0.36
PCGF1Q9BSM1 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCGF1Q9BSM1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.32■□□□□ 0.36
PCGF1Q9BSM1 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCGF1Q9BSM1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCGF1Q9BSM1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCGF1Q9BSM1 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCGF1Q9BSM1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PCGF1Q9BSM1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCGF1Q9BSM1 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCGF1Q9BSM1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCGF1Q9BSM1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PCGF1Q9BSM1 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PCGF1Q9BSM1 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCGF1Q9BSM1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCGF1Q9BSM1 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.32■□□□□ 0.36
PCGF1Q9BSM1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.32■□□□□ 0.36
PCGF1Q9BSM1 SLC7A5P2-201ENST00000553010 536 ntBASIC17.32■□□□□ 0.36
PCGF1Q9BSM1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.32■□□□□ 0.36
PCGF1Q9BSM1 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.32■□□□□ 0.36
PCGF1Q9BSM1 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.32■□□□□ 0.36
PCGF1Q9BSM1 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCGF1Q9BSM1 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.32■□□□□ 0.36
PCGF1Q9BSM1 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PCGF1Q9BSM1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.32■□□□□ 0.36
PCGF1Q9BSM1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCGF1Q9BSM1 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCGF1Q9BSM1 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCGF1Q9BSM1 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCGF1Q9BSM1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCGF1Q9BSM1 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCGF1Q9BSM1 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCGF1Q9BSM1 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.31■□□□□ 0.36
PCGF1Q9BSM1 AC026471.6-201ENST00000622954 1905 ntBASIC17.31■□□□□ 0.36
PCGF1Q9BSM1 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.31■□□□□ 0.36
PCGF1Q9BSM1 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCGF1Q9BSM1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCGF1Q9BSM1 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PCGF1Q9BSM1 ID1-201ENST00000376105 1233 ntBASIC17.31■□□□□ 0.36
PCGF1Q9BSM1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.31■□□□□ 0.36
PCGF1Q9BSM1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCGF1Q9BSM1 RAP2CP1-201ENST00000605103 478 ntBASIC17.31■□□□□ 0.36
PCGF1Q9BSM1 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCGF1Q9BSM1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCGF1Q9BSM1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCGF1Q9BSM1 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCGF1Q9BSM1 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCGF1Q9BSM1 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.31■□□□□ 0.36
PCGF1Q9BSM1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.31■□□□□ 0.36
PCGF1Q9BSM1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.31■□□□□ 0.36
PCGF1Q9BSM1 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCGF1Q9BSM1 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCGF1Q9BSM1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCGF1Q9BSM1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCGF1Q9BSM1 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.3■□□□□ 0.36
PCGF1Q9BSM1 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCGF1Q9BSM1 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
PCGF1Q9BSM1 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCGF1Q9BSM1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCGF1Q9BSM1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.3■□□□□ 0.36
PCGF1Q9BSM1 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PCGF1Q9BSM1 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCGF1Q9BSM1 MIR663A-201ENST00000385250 93 ntBASIC17.3■□□□□ 0.36
PCGF1Q9BSM1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.3■□□□□ 0.36
PCGF1Q9BSM1 AC007322.1-201ENST00000426983 750 ntBASIC17.3■□□□□ 0.36
PCGF1Q9BSM1 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCGF1Q9BSM1 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.3■□□□□ 0.36
PCGF1Q9BSM1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PCGF1Q9BSM1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.3■□□□□ 0.36
PCGF1Q9BSM1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCGF1Q9BSM1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCGF1Q9BSM1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCGF1Q9BSM1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.3■□□□□ 0.36
PCGF1Q9BSM1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PCGF1Q9BSM1 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.29■□□□□ 0.36
PCGF1Q9BSM1 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PCGF1Q9BSM1 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCGF1Q9BSM1 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCGF1Q9BSM1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCGF1Q9BSM1 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCGF1Q9BSM1 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCGF1Q9BSM1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.29■□□□□ 0.36
PCGF1Q9BSM1 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
PCGF1Q9BSM1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.29■□□□□ 0.36
PCGF1Q9BSM1 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.29■□□□□ 0.36
PCGF1Q9BSM1 AC231657.2-201ENST00000624556 255 ntBASIC17.29■□□□□ 0.36
PCGF1Q9BSM1 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCGF1Q9BSM1 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCGF1Q9BSM1 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms