Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CPPED1Q9BRF8 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPPED1Q9BRF8 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.5■□□□□ 0.71
CPPED1Q9BRF8 AC053503.5-201ENST00000601508 636 ntBASIC19.5■□□□□ 0.71
CPPED1Q9BRF8 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.5■□□□□ 0.71
CPPED1Q9BRF8 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CPPED1Q9BRF8 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPPED1Q9BRF8 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.5■□□□□ 0.71
CPPED1Q9BRF8 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CPPED1Q9BRF8 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPPED1Q9BRF8 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPPED1Q9BRF8 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.49■□□□□ 0.71
CPPED1Q9BRF8 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPPED1Q9BRF8 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPPED1Q9BRF8 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CPPED1Q9BRF8 AC061975.6-201ENST00000579045 1553 ntBASIC19.49■□□□□ 0.71
CPPED1Q9BRF8 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.49■□□□□ 0.71
CPPED1Q9BRF8 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.49■□□□□ 0.71
CPPED1Q9BRF8 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CPPED1Q9BRF8 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CPPED1Q9BRF8 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CPPED1Q9BRF8 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.48■□□□□ 0.71
CPPED1Q9BRF8 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPPED1Q9BRF8 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.48■□□□□ 0.71
CPPED1Q9BRF8 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPPED1Q9BRF8 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPPED1Q9BRF8 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPPED1Q9BRF8 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CPPED1Q9BRF8 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CPPED1Q9BRF8 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPPED1Q9BRF8 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.48■□□□□ 0.71
CPPED1Q9BRF8 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CPPED1Q9BRF8 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.48■□□□□ 0.71
CPPED1Q9BRF8 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CPPED1Q9BRF8 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPPED1Q9BRF8 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CPPED1Q9BRF8 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.48■□□□□ 0.71
CPPED1Q9BRF8 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPPED1Q9BRF8 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CPPED1Q9BRF8 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.48■□□□□ 0.71
CPPED1Q9BRF8 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.48■□□□□ 0.71
CPPED1Q9BRF8 AP004607.4-201ENST00000530158 1459 ntBASIC19.48■□□□□ 0.71
CPPED1Q9BRF8 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.48■□□□□ 0.71
CPPED1Q9BRF8 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.47■□□□□ 0.71
CPPED1Q9BRF8 AFG3L1P-217ENST00000557444 2447 ntBASIC19.47■□□□□ 0.71
CPPED1Q9BRF8 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.47■□□□□ 0.71
CPPED1Q9BRF8 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.47■□□□□ 0.71
CPPED1Q9BRF8 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CPPED1Q9BRF8 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CPPED1Q9BRF8 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.47■□□□□ 0.71
CPPED1Q9BRF8 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CPPED1Q9BRF8 MIR572-201ENST00000384983 95 ntBASIC19.47■□□□□ 0.71
CPPED1Q9BRF8 AP001330.3-201ENST00000520123 633 ntBASIC19.47■□□□□ 0.71
CPPED1Q9BRF8 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.47■□□□□ 0.71
CPPED1Q9BRF8 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.47■□□□□ 0.71
CPPED1Q9BRF8 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CPPED1Q9BRF8 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CPPED1Q9BRF8 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CPPED1Q9BRF8 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.47■□□□□ 0.71
CPPED1Q9BRF8 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CPPED1Q9BRF8 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CPPED1Q9BRF8 PCDHAC2-203ENST00000615316 3011 ntBASIC19.46■□□□□ 0.71
CPPED1Q9BRF8 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.46■□□□□ 0.71
CPPED1Q9BRF8 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.46■□□□□ 0.71
CPPED1Q9BRF8 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPPED1Q9BRF8 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.46■□□□□ 0.71
CPPED1Q9BRF8 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPPED1Q9BRF8 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CPPED1Q9BRF8 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CPPED1Q9BRF8 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPPED1Q9BRF8 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CPPED1Q9BRF8 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CPPED1Q9BRF8 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.46■□□□□ 0.71
CPPED1Q9BRF8 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.46■□□□□ 0.71
CPPED1Q9BRF8 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
CPPED1Q9BRF8 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.46■□□□□ 0.71
CPPED1Q9BRF8 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.46■□□□□ 0.71
CPPED1Q9BRF8 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CPPED1Q9BRF8 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CPPED1Q9BRF8 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CPPED1Q9BRF8 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CPPED1Q9BRF8 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.46■□□□□ 0.71
CPPED1Q9BRF8 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPPED1Q9BRF8 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPPED1Q9BRF8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPPED1Q9BRF8 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPPED1Q9BRF8 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.46■□□□□ 0.71
CPPED1Q9BRF8 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPPED1Q9BRF8 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CPPED1Q9BRF8 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CPPED1Q9BRF8 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CPPED1Q9BRF8 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
CPPED1Q9BRF8 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CPPED1Q9BRF8 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.45■□□□□ 0.7
CPPED1Q9BRF8 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPPED1Q9BRF8 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPPED1Q9BRF8 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
CPPED1Q9BRF8 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPPED1Q9BRF8 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CPPED1Q9BRF8 AC099778.1-201ENST00000568593 1911 ntBASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms