Protein–RNA interactions for Protein: Q9BR84

ZNF559, Zinc finger protein 559, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559Q9BR84 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ZNF559Q9BR84 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF559Q9BR84 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF559Q9BR84 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF559Q9BR84 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
ZNF559Q9BR84 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF559Q9BR84 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF559Q9BR84 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF559Q9BR84 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF559Q9BR84 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.17■□□□□ 0.66
ZNF559Q9BR84 AL355802.2-201ENST00000402069 882 ntBASIC19.17■□□□□ 0.66
ZNF559Q9BR84 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.17■□□□□ 0.66
ZNF559Q9BR84 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.17■□□□□ 0.66
ZNF559Q9BR84 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.17■□□□□ 0.66
ZNF559Q9BR84 TPRG1LP1-201ENST00000598702 760 ntBASIC19.17■□□□□ 0.66
ZNF559Q9BR84 AC053503.5-201ENST00000601508 636 ntBASIC19.17■□□□□ 0.66
ZNF559Q9BR84 AC104771.1-201ENST00000603335 964 ntBASIC19.17■□□□□ 0.66
ZNF559Q9BR84 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.17■□□□□ 0.66
ZNF559Q9BR84 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF559Q9BR84 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
ZNF559Q9BR84 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF559Q9BR84 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
ZNF559Q9BR84 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.17■□□□□ 0.66
ZNF559Q9BR84 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF559Q9BR84 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ZNF559Q9BR84 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF559Q9BR84 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.16■□□□□ 0.66
ZNF559Q9BR84 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF559Q9BR84 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.16■□□□□ 0.66
ZNF559Q9BR84 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.16■□□□□ 0.66
ZNF559Q9BR84 EEF1DP3-203ENST00000566025 782 ntBASIC19.16■□□□□ 0.66
ZNF559Q9BR84 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF559Q9BR84 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.16■□□□□ 0.66
ZNF559Q9BR84 AL109923.1-201ENST00000618799 583 ntBASIC19.16■□□□□ 0.66
ZNF559Q9BR84 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF559Q9BR84 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF559Q9BR84 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF559Q9BR84 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF559Q9BR84 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.16■□□□□ 0.66
ZNF559Q9BR84 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF559Q9BR84 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF559Q9BR84 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF559Q9BR84 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.16■□□□□ 0.66
ZNF559Q9BR84 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
ZNF559Q9BR84 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF559Q9BR84 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF559Q9BR84 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF559Q9BR84 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF559Q9BR84 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
ZNF559Q9BR84 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF559Q9BR84 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
ZNF559Q9BR84 KRT19P1-201ENST00000405746 1186 ntBASIC19.15■□□□□ 0.66
ZNF559Q9BR84 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
ZNF559Q9BR84 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.15■□□□□ 0.66
ZNF559Q9BR84 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.15■□□□□ 0.66
ZNF559Q9BR84 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.15■□□□□ 0.66
ZNF559Q9BR84 KRT18P61-201ENST00000585825 1298 ntBASIC19.15■□□□□ 0.66
ZNF559Q9BR84 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.15■□□□□ 0.66
ZNF559Q9BR84 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
ZNF559Q9BR84 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.15■□□□□ 0.66
ZNF559Q9BR84 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.15■□□□□ 0.66
ZNF559Q9BR84 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF559Q9BR84 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
ZNF559Q9BR84 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ZNF559Q9BR84 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
ZNF559Q9BR84 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
ZNF559Q9BR84 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.14■□□□□ 0.65
ZNF559Q9BR84 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.14■□□□□ 0.65
ZNF559Q9BR84 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF559Q9BR84 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.14■□□□□ 0.65
ZNF559Q9BR84 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.14■□□□□ 0.65
ZNF559Q9BR84 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.14■□□□□ 0.65
ZNF559Q9BR84 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
ZNF559Q9BR84 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF559Q9BR84 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF559Q9BR84 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.14■□□□□ 0.65
ZNF559Q9BR84 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF559Q9BR84 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.14■□□□□ 0.65
ZNF559Q9BR84 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
ZNF559Q9BR84 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
ZNF559Q9BR84 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF559Q9BR84 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF559Q9BR84 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF559Q9BR84 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.13■□□□□ 0.65
ZNF559Q9BR84 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF559Q9BR84 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF559Q9BR84 ABHD17AP1-201ENST00000358206 933 ntBASIC19.13■□□□□ 0.65
ZNF559Q9BR84 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF559Q9BR84 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF559Q9BR84 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.13■□□□□ 0.65
ZNF559Q9BR84 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF559Q9BR84 AC004854.2-201ENST00000608450 1441 ntBASIC19.13■□□□□ 0.65
ZNF559Q9BR84 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
ZNF559Q9BR84 AP004607.4-201ENST00000530158 1459 ntBASIC19.13■□□□□ 0.65
ZNF559Q9BR84 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF559Q9BR84 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.13■□□□□ 0.65
ZNF559Q9BR84 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.13■□□□□ 0.65
ZNF559Q9BR84 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.13■□□□□ 0.65
ZNF559Q9BR84 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF559Q9BR84 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms