Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 AC007225.1-201ENST00000566331 1836 ntBASIC22.02■■□□□ 1.12
PCDHB18PQ96TA0 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHB18PQ96TA0 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
PCDHB18PQ96TA0 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC22.02■■□□□ 1.12
PCDHB18PQ96TA0 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHB18PQ96TA0 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22.02■■□□□ 1.12
PCDHB18PQ96TA0 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.11
PCDHB18PQ96TA0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.11
PCDHB18PQ96TA0 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHB18PQ96TA0 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHB18PQ96TA0 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHB18PQ96TA0 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.01■■□□□ 1.11
PCDHB18PQ96TA0 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
PCDHB18PQ96TA0 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.01■■□□□ 1.11
PCDHB18PQ96TA0 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.01■■□□□ 1.11
PCDHB18PQ96TA0 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC22.01■■□□□ 1.11
PCDHB18PQ96TA0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC22.01■■□□□ 1.11
PCDHB18PQ96TA0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHB18PQ96TA0 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHB18PQ96TA0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.01■■□□□ 1.11
PCDHB18PQ96TA0 AP005212.1-201ENST00000581547 1997 ntBASIC22.01■■□□□ 1.11
PCDHB18PQ96TA0 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDHB18PQ96TA0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHB18PQ96TA0 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC22■■□□□ 1.11
PCDHB18PQ96TA0 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHB18PQ96TA0 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHB18PQ96TA0 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHB18PQ96TA0 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHB18PQ96TA0 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC22■■□□□ 1.11
PCDHB18PQ96TA0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC22■■□□□ 1.11
PCDHB18PQ96TA0 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHB18PQ96TA0 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHB18PQ96TA0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHB18PQ96TA0 AC027702.1-201ENST00000563810 1770 ntBASIC21.99■■□□□ 1.11
PCDHB18PQ96TA0 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.99■■□□□ 1.11
PCDHB18PQ96TA0 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHB18PQ96TA0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHB18PQ96TA0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
PCDHB18PQ96TA0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.99■■□□□ 1.11
PCDHB18PQ96TA0 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHB18PQ96TA0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHB18PQ96TA0 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
PCDHB18PQ96TA0 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHB18PQ96TA0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHB18PQ96TA0 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.99■■□□□ 1.11
PCDHB18PQ96TA0 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHB18PQ96TA0 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHB18PQ96TA0 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.99■■□□□ 1.11
PCDHB18PQ96TA0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHB18PQ96TA0 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHB18PQ96TA0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHB18PQ96TA0 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHB18PQ96TA0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.99■■□□□ 1.11
PCDHB18PQ96TA0 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHB18PQ96TA0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.99■■□□□ 1.11
PCDHB18PQ96TA0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHB18PQ96TA0 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.98■■□□□ 1.11
PCDHB18PQ96TA0 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
PCDHB18PQ96TA0 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHB18PQ96TA0 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
PCDHB18PQ96TA0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
PCDHB18PQ96TA0 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHB18PQ96TA0 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHB18PQ96TA0 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHB18PQ96TA0 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHB18PQ96TA0 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHB18PQ96TA0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.98■■□□□ 1.11
PCDHB18PQ96TA0 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHB18PQ96TA0 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
PCDHB18PQ96TA0 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
PCDHB18PQ96TA0 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHB18PQ96TA0 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHB18PQ96TA0 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHB18PQ96TA0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHB18PQ96TA0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.97■■□□□ 1.11
PCDHB18PQ96TA0 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHB18PQ96TA0 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHB18PQ96TA0 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHB18PQ96TA0 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.97■■□□□ 1.11
PCDHB18PQ96TA0 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.97■■□□□ 1.11
PCDHB18PQ96TA0 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.97■■□□□ 1.11
PCDHB18PQ96TA0 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.97■■□□□ 1.11
PCDHB18PQ96TA0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.97■■□□□ 1.11
PCDHB18PQ96TA0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.97■■□□□ 1.11
PCDHB18PQ96TA0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.96■■□□□ 1.11
PCDHB18PQ96TA0 FP700111.2-201ENST00000619190 1892 ntBASIC21.96■■□□□ 1.11
PCDHB18PQ96TA0 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHB18PQ96TA0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHB18PQ96TA0 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHB18PQ96TA0 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.96■■□□□ 1.11
PCDHB18PQ96TA0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.96■■□□□ 1.11
PCDHB18PQ96TA0 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
PCDHB18PQ96TA0 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
PCDHB18PQ96TA0 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHB18PQ96TA0 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
PCDHB18PQ96TA0 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.96■■□□□ 1.11
PCDHB18PQ96TA0 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
PCDHB18PQ96TA0 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHB18PQ96TA0 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.96■■□□□ 1.11
PCDHB18PQ96TA0 AC120498.10-201ENST00000621827 505 ntBASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms