Protein–RNA interactions for Protein: Q96RV3

PCNX1, Pecanex-like protein 1, humanhuman

Predictions only

Length 2,341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1Q96RV3 CDV3P1-201ENST00000471403 739 ntBASIC18.33■□□□□ 0.52
PCNX1Q96RV3 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.33■□□□□ 0.52
PCNX1Q96RV3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.33■□□□□ 0.52
PCNX1Q96RV3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCNX1Q96RV3 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCNX1Q96RV3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCNX1Q96RV3 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.32■□□□□ 0.52
PCNX1Q96RV3 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCNX1Q96RV3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
PCNX1Q96RV3 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.32■□□□□ 0.52
PCNX1Q96RV3 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.32■□□□□ 0.52
PCNX1Q96RV3 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCNX1Q96RV3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCNX1Q96RV3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.32■□□□□ 0.52
PCNX1Q96RV3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.32■□□□□ 0.52
PCNX1Q96RV3 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.32■□□□□ 0.52
PCNX1Q96RV3 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.32■□□□□ 0.52
PCNX1Q96RV3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.32■□□□□ 0.52
PCNX1Q96RV3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCNX1Q96RV3 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.32■□□□□ 0.52
PCNX1Q96RV3 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCNX1Q96RV3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.32■□□□□ 0.52
PCNX1Q96RV3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCNX1Q96RV3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCNX1Q96RV3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCNX1Q96RV3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.32■□□□□ 0.52
PCNX1Q96RV3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.32■□□□□ 0.52
PCNX1Q96RV3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
PCNX1Q96RV3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCNX1Q96RV3 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.32■□□□□ 0.52
PCNX1Q96RV3 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PCNX1Q96RV3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
PCNX1Q96RV3 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCNX1Q96RV3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PCNX1Q96RV3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCNX1Q96RV3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PCNX1Q96RV3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCNX1Q96RV3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCNX1Q96RV3 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCNX1Q96RV3 KRT18P68-201ENST00000392293 1000 ntBASIC18.31■□□□□ 0.52
PCNX1Q96RV3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCNX1Q96RV3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCNX1Q96RV3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCNX1Q96RV3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
PCNX1Q96RV3 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCNX1Q96RV3 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.31■□□□□ 0.52
PCNX1Q96RV3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCNX1Q96RV3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PCNX1Q96RV3 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.31■□□□□ 0.52
PCNX1Q96RV3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.31■□□□□ 0.52
PCNX1Q96RV3 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCNX1Q96RV3 MTDHP1-201ENST00000605323 784 ntBASIC18.31■□□□□ 0.52
PCNX1Q96RV3 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.31■□□□□ 0.52
PCNX1Q96RV3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCNX1Q96RV3 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCNX1Q96RV3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.3■□□□□ 0.52
PCNX1Q96RV3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCNX1Q96RV3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCNX1Q96RV3 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.3■□□□□ 0.52
PCNX1Q96RV3 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCNX1Q96RV3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCNX1Q96RV3 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCNX1Q96RV3 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.3■□□□□ 0.52
PCNX1Q96RV3 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.3■□□□□ 0.52
PCNX1Q96RV3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.3■□□□□ 0.52
PCNX1Q96RV3 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCNX1Q96RV3 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.3■□□□□ 0.52
PCNX1Q96RV3 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCNX1Q96RV3 SOX15-203ENST00000570788 1093 ntBASIC18.3■□□□□ 0.52
PCNX1Q96RV3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.3■□□□□ 0.52
PCNX1Q96RV3 AC010331.1-201ENST00000611423 582 ntBASIC18.3■□□□□ 0.52
PCNX1Q96RV3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCNX1Q96RV3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCNX1Q96RV3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCNX1Q96RV3 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCNX1Q96RV3 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCNX1Q96RV3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCNX1Q96RV3 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCNX1Q96RV3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCNX1Q96RV3 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCNX1Q96RV3 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.29■□□□□ 0.52
PCNX1Q96RV3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
PCNX1Q96RV3 SNORA78-201ENST00000459373 127 ntBASIC18.29■□□□□ 0.52
PCNX1Q96RV3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.29■□□□□ 0.52
PCNX1Q96RV3 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.29■□□□□ 0.52
PCNX1Q96RV3 LINC01023-201ENST00000606054 436 ntBASIC18.29■□□□□ 0.52
PCNX1Q96RV3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCNX1Q96RV3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PCNX1Q96RV3 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.29■□□□□ 0.52
PCNX1Q96RV3 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCNX1Q96RV3 AC092053.2-201ENST00000640557 1818 ntBASIC18.29■□□□□ 0.52
PCNX1Q96RV3 AC092368.3-202ENST00000574180 1591 ntBASIC18.29■□□□□ 0.52
PCNX1Q96RV3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.29■□□□□ 0.52
PCNX1Q96RV3 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCNX1Q96RV3 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCNX1Q96RV3 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.29■□□□□ 0.52
PCNX1Q96RV3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.29■□□□□ 0.52
PCNX1Q96RV3 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCNX1Q96RV3 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCNX1Q96RV3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms