Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH15Q96QU1 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH15Q96QU1 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH15Q96QU1 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH15Q96QU1 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH15Q96QU1 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDH15Q96QU1 BX088651.1-201ENST00000540551 451 ntBASIC20.36■□□□□ 0.85
PCDH15Q96QU1 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
PCDH15Q96QU1 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDH15Q96QU1 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDH15Q96QU1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
PCDH15Q96QU1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH15Q96QU1 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH15Q96QU1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH15Q96QU1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH15Q96QU1 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH15Q96QU1 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH15Q96QU1 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH15Q96QU1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH15Q96QU1 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH15Q96QU1 MIR1224-201ENST00000408193 85 ntBASIC20.35■□□□□ 0.85
PCDH15Q96QU1 FAM210CP-201ENST00000445714 574 ntBASIC20.35■□□□□ 0.85
PCDH15Q96QU1 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.35■□□□□ 0.85
PCDH15Q96QU1 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PCDH15Q96QU1 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
PCDH15Q96QU1 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH15Q96QU1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH15Q96QU1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH15Q96QU1 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.35■□□□□ 0.85
PCDH15Q96QU1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH15Q96QU1 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH15Q96QU1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PCDH15Q96QU1 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH15Q96QU1 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH15Q96QU1 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
PCDH15Q96QU1 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH15Q96QU1 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PCDH15Q96QU1 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH15Q96QU1 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
PCDH15Q96QU1 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH15Q96QU1 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH15Q96QU1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.35■□□□□ 0.85
PCDH15Q96QU1 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH15Q96QU1 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH15Q96QU1 AC010542.4-201ENST00000563151 1910 ntBASIC20.34■□□□□ 0.85
PCDH15Q96QU1 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.34■□□□□ 0.85
PCDH15Q96QU1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
PCDH15Q96QU1 KRT18P68-201ENST00000392293 1000 ntBASIC20.34■□□□□ 0.85
PCDH15Q96QU1 AC211429.1-201ENST00000415277 523 ntBASIC20.34■□□□□ 0.85
PCDH15Q96QU1 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH15Q96QU1 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
PCDH15Q96QU1 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.34■□□□□ 0.85
PCDH15Q96QU1 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH15Q96QU1 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PCDH15Q96QU1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDH15Q96QU1 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
PCDH15Q96QU1 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.34■□□□□ 0.85
PCDH15Q96QU1 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH15Q96QU1 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PCDH15Q96QU1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDH15Q96QU1 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.34■□□□□ 0.85
PCDH15Q96QU1 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.34■□□□□ 0.85
PCDH15Q96QU1 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH15Q96QU1 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDH15Q96QU1 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDH15Q96QU1 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH15Q96QU1 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.34■□□□□ 0.85
PCDH15Q96QU1 AC010331.1-201ENST00000611423 582 ntBASIC20.34■□□□□ 0.85
PCDH15Q96QU1 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH15Q96QU1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH15Q96QU1 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDH15Q96QU1 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDH15Q96QU1 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDH15Q96QU1 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
PCDH15Q96QU1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDH15Q96QU1 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.33■□□□□ 0.84
PCDH15Q96QU1 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
PCDH15Q96QU1 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PCDH15Q96QU1 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.33■□□□□ 0.84
PCDH15Q96QU1 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.33■□□□□ 0.84
PCDH15Q96QU1 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDH15Q96QU1 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDH15Q96QU1 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.33■□□□□ 0.84
PCDH15Q96QU1 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.33■□□□□ 0.84
PCDH15Q96QU1 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PCDH15Q96QU1 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.33■□□□□ 0.84
PCDH15Q96QU1 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PCDH15Q96QU1 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDH15Q96QU1 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.32■□□□□ 0.84
PCDH15Q96QU1 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH15Q96QU1 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.32■□□□□ 0.84
PCDH15Q96QU1 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
PCDH15Q96QU1 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDH15Q96QU1 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.32■□□□□ 0.84
PCDH15Q96QU1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
PCDH15Q96QU1 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.32■□□□□ 0.84
PCDH15Q96QU1 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH15Q96QU1 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
PCDH15Q96QU1 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH15Q96QU1 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms