Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.4■■□□□ 1.02
RPRD1AQ96P16 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RPRD1AQ96P16 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
RPRD1AQ96P16 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.4■■□□□ 1.02
RPRD1AQ96P16 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.4■■□□□ 1.02
RPRD1AQ96P16 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RPRD1AQ96P16 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RPRD1AQ96P16 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
RPRD1AQ96P16 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
RPRD1AQ96P16 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RPRD1AQ96P16 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.39■■□□□ 1.02
RPRD1AQ96P16 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
RPRD1AQ96P16 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RPRD1AQ96P16 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.39■■□□□ 1.01
RPRD1AQ96P16 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.39■■□□□ 1.01
RPRD1AQ96P16 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
RPRD1AQ96P16 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.39■■□□□ 1.01
RPRD1AQ96P16 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
RPRD1AQ96P16 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.39■■□□□ 1.01
RPRD1AQ96P16 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RPRD1AQ96P16 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RPRD1AQ96P16 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
RPRD1AQ96P16 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RPRD1AQ96P16 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.39■■□□□ 1.01
RPRD1AQ96P16 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RPRD1AQ96P16 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RPRD1AQ96P16 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RPRD1AQ96P16 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RPRD1AQ96P16 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.38■■□□□ 1.01
RPRD1AQ96P16 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RPRD1AQ96P16 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
RPRD1AQ96P16 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.38■■□□□ 1.01
RPRD1AQ96P16 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RPRD1AQ96P16 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
RPRD1AQ96P16 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.38■■□□□ 1.01
RPRD1AQ96P16 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.38■■□□□ 1.01
RPRD1AQ96P16 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.38■■□□□ 1.01
RPRD1AQ96P16 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.38■■□□□ 1.01
RPRD1AQ96P16 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.38■■□□□ 1.01
RPRD1AQ96P16 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.38■■□□□ 1.01
RPRD1AQ96P16 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.38■■□□□ 1.01
RPRD1AQ96P16 AC008694.1-202ENST00000636953 945 ntBASIC21.38■■□□□ 1.01
RPRD1AQ96P16 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
RPRD1AQ96P16 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RPRD1AQ96P16 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
RPRD1AQ96P16 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
RPRD1AQ96P16 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.37■■□□□ 1.01
RPRD1AQ96P16 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RPRD1AQ96P16 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.37■■□□□ 1.01
RPRD1AQ96P16 NCF1B-203ENST00000435988 1254 ntBASIC21.37■■□□□ 1.01
RPRD1AQ96P16 CDV3P1-201ENST00000471403 739 ntBASIC21.37■■□□□ 1.01
RPRD1AQ96P16 AL162412.1-201ENST00000567129 965 ntBASIC21.37■■□□□ 1.01
RPRD1AQ96P16 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
RPRD1AQ96P16 AC069236.1-201ENST00000604339 616 ntBASIC21.37■■□□□ 1.01
RPRD1AQ96P16 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.37■■□□□ 1.01
RPRD1AQ96P16 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RPRD1AQ96P16 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RPRD1AQ96P16 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.37■■□□□ 1.01
RPRD1AQ96P16 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RPRD1AQ96P16 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
RPRD1AQ96P16 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RPRD1AQ96P16 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RPRD1AQ96P16 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RPRD1AQ96P16 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RPRD1AQ96P16 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
RPRD1AQ96P16 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.36■■□□□ 1.01
RPRD1AQ96P16 AC016405.3-201ENST00000607710 860 ntBASIC21.36■■□□□ 1.01
RPRD1AQ96P16 AL121832.2-201ENST00000610979 668 ntBASIC21.36■■□□□ 1.01
RPRD1AQ96P16 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.36■■□□□ 1.01
RPRD1AQ96P16 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
RPRD1AQ96P16 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.36■■□□□ 1.01
RPRD1AQ96P16 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
RPRD1AQ96P16 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.36■■□□□ 1.01
RPRD1AQ96P16 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.36■■□□□ 1.01
RPRD1AQ96P16 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RPRD1AQ96P16 FEM1AP4-201ENST00000443167 1987 ntBASIC21.36■■□□□ 1.01
RPRD1AQ96P16 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.36■■□□□ 1.01
RPRD1AQ96P16 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RPRD1AQ96P16 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RPRD1AQ96P16 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RPRD1AQ96P16 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
RPRD1AQ96P16 ID1-201ENST00000376105 1233 ntBASIC21.35■■□□□ 1.01
RPRD1AQ96P16 GPX1P1-201ENST00000388829 606 ntBASIC21.35■■□□□ 1.01
RPRD1AQ96P16 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.35■■□□□ 1.01
RPRD1AQ96P16 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
RPRD1AQ96P16 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
RPRD1AQ96P16 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
RPRD1AQ96P16 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
RPRD1AQ96P16 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.35■■□□□ 1.01
RPRD1AQ96P16 AC026310.3-201ENST00000625186 2373 ntBASIC21.34■■□□□ 1.01
RPRD1AQ96P16 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RPRD1AQ96P16 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RPRD1AQ96P16 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RPRD1AQ96P16 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.34■■□□□ 1.01
RPRD1AQ96P16 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.34■■□□□ 1.01
RPRD1AQ96P16 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RPRD1AQ96P16 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
RPRD1AQ96P16 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
RPRD1AQ96P16 HLA-L-209ENST00000420110 1011 ntBASIC21.34■■□□□ 1.01
RPRD1AQ96P16 AC083906.2-201ENST00000511578 360 ntBASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms