Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
NSMCE2Q96MF7 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.54■□□□□ 0.72
NSMCE2Q96MF7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
NSMCE2Q96MF7 RARRES2P1-201ENST00000474487 481 ntBASIC19.54■□□□□ 0.72
NSMCE2Q96MF7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NSMCE2Q96MF7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
NSMCE2Q96MF7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.54■□□□□ 0.72
NSMCE2Q96MF7 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NSMCE2Q96MF7 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.54■□□□□ 0.72
NSMCE2Q96MF7 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NSMCE2Q96MF7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NSMCE2Q96MF7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.54■□□□□ 0.72
NSMCE2Q96MF7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.54■□□□□ 0.72
NSMCE2Q96MF7 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.54■□□□□ 0.72
NSMCE2Q96MF7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NSMCE2Q96MF7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
NSMCE2Q96MF7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NSMCE2Q96MF7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.53■□□□□ 0.72
NSMCE2Q96MF7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NSMCE2Q96MF7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NSMCE2Q96MF7 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.53■□□□□ 0.72
NSMCE2Q96MF7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.53■□□□□ 0.72
NSMCE2Q96MF7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NSMCE2Q96MF7 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NSMCE2Q96MF7 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NSMCE2Q96MF7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.52■□□□□ 0.72
NSMCE2Q96MF7 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NSMCE2Q96MF7 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.52■□□□□ 0.72
NSMCE2Q96MF7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NSMCE2Q96MF7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NSMCE2Q96MF7 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.52■□□□□ 0.72
NSMCE2Q96MF7 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.52■□□□□ 0.72
NSMCE2Q96MF7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.52■□□□□ 0.72
NSMCE2Q96MF7 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.52■□□□□ 0.72
NSMCE2Q96MF7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NSMCE2Q96MF7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NSMCE2Q96MF7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
NSMCE2Q96MF7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.52■□□□□ 0.72
NSMCE2Q96MF7 AL512408.1-201ENST00000569378 2000 ntBASIC19.52■□□□□ 0.72
NSMCE2Q96MF7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NSMCE2Q96MF7 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.52■□□□□ 0.72
NSMCE2Q96MF7 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
NSMCE2Q96MF7 AC112907.3-201ENST00000577781 2400 ntBASIC19.52■□□□□ 0.71
NSMCE2Q96MF7 AL162377.1-201ENST00000618844 1793 ntBASIC19.52■□□□□ 0.71
NSMCE2Q96MF7 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
NSMCE2Q96MF7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
NSMCE2Q96MF7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.52■□□□□ 0.71
NSMCE2Q96MF7 FP700111.2-201ENST00000619190 1892 ntBASIC19.52■□□□□ 0.71
NSMCE2Q96MF7 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NSMCE2Q96MF7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.51■□□□□ 0.71
NSMCE2Q96MF7 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NSMCE2Q96MF7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
NSMCE2Q96MF7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
NSMCE2Q96MF7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
NSMCE2Q96MF7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NSMCE2Q96MF7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
NSMCE2Q96MF7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NSMCE2Q96MF7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NSMCE2Q96MF7 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.51■□□□□ 0.71
NSMCE2Q96MF7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NSMCE2Q96MF7 MIR3621-201ENST00000580529 85 ntBASIC19.51■□□□□ 0.71
NSMCE2Q96MF7 AL138724.1-201ENST00000606771 1088 ntBASIC19.51■□□□□ 0.71
NSMCE2Q96MF7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.51■□□□□ 0.71
NSMCE2Q96MF7 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NSMCE2Q96MF7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
NSMCE2Q96MF7 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NSMCE2Q96MF7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.51■□□□□ 0.71
NSMCE2Q96MF7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NSMCE2Q96MF7 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.51■□□□□ 0.71
NSMCE2Q96MF7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NSMCE2Q96MF7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NSMCE2Q96MF7 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NSMCE2Q96MF7 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
NSMCE2Q96MF7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NSMCE2Q96MF7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NSMCE2Q96MF7 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NSMCE2Q96MF7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NSMCE2Q96MF7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.5■□□□□ 0.71
NSMCE2Q96MF7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
NSMCE2Q96MF7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NSMCE2Q96MF7 SLC47A1P1-202ENST00000449666 945 ntBASIC19.5■□□□□ 0.71
NSMCE2Q96MF7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.5■□□□□ 0.71
NSMCE2Q96MF7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.5■□□□□ 0.71
NSMCE2Q96MF7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.5■□□□□ 0.71
NSMCE2Q96MF7 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NSMCE2Q96MF7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.5■□□□□ 0.71
NSMCE2Q96MF7 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NSMCE2Q96MF7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NSMCE2Q96MF7 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NSMCE2Q96MF7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NSMCE2Q96MF7 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NSMCE2Q96MF7 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
NSMCE2Q96MF7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.49■□□□□ 0.71
NSMCE2Q96MF7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.49■□□□□ 0.71
NSMCE2Q96MF7 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NSMCE2Q96MF7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
NSMCE2Q96MF7 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NSMCE2Q96MF7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NSMCE2Q96MF7 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NSMCE2Q96MF7 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms