Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.28■□□□□ 0.84
PDLIM5Q96HC4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDLIM5Q96HC4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDLIM5Q96HC4 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDLIM5Q96HC4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDLIM5Q96HC4 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PDLIM5Q96HC4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDLIM5Q96HC4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDLIM5Q96HC4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDLIM5Q96HC4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.27■□□□□ 0.84
PDLIM5Q96HC4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.27■□□□□ 0.84
PDLIM5Q96HC4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
PDLIM5Q96HC4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDLIM5Q96HC4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDLIM5Q96HC4 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PDLIM5Q96HC4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDLIM5Q96HC4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.27■□□□□ 0.84
PDLIM5Q96HC4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PDLIM5Q96HC4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDLIM5Q96HC4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.27■□□□□ 0.84
PDLIM5Q96HC4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDLIM5Q96HC4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PDLIM5Q96HC4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PDLIM5Q96HC4 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.27■□□□□ 0.84
PDLIM5Q96HC4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDLIM5Q96HC4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDLIM5Q96HC4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PDLIM5Q96HC4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDLIM5Q96HC4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.26■□□□□ 0.83
PDLIM5Q96HC4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PDLIM5Q96HC4 AL157384.1-201ENST00000445995 2473 ntBASIC20.26■□□□□ 0.83
PDLIM5Q96HC4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDLIM5Q96HC4 AC034268.1-201ENST00000441047 882 ntBASIC20.26■□□□□ 0.83
PDLIM5Q96HC4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.26■□□□□ 0.83
PDLIM5Q96HC4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.26■□□□□ 0.83
PDLIM5Q96HC4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.26■□□□□ 0.83
PDLIM5Q96HC4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDLIM5Q96HC4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.26■□□□□ 0.83
PDLIM5Q96HC4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.26■□□□□ 0.83
PDLIM5Q96HC4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDLIM5Q96HC4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDLIM5Q96HC4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDLIM5Q96HC4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.26■□□□□ 0.83
PDLIM5Q96HC4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDLIM5Q96HC4 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDLIM5Q96HC4 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PDLIM5Q96HC4 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDLIM5Q96HC4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PDLIM5Q96HC4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.25■□□□□ 0.83
PDLIM5Q96HC4 AP005212.1-201ENST00000581547 1997 ntBASIC20.25■□□□□ 0.83
PDLIM5Q96HC4 GABARAPL3-202ENST00000624044 1851 ntBASIC20.25■□□□□ 0.83
PDLIM5Q96HC4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.25■□□□□ 0.83
PDLIM5Q96HC4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.25■□□□□ 0.83
PDLIM5Q96HC4 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
PDLIM5Q96HC4 AC116050.2-201ENST00000612102 1779 ntBASIC20.25■□□□□ 0.83
PDLIM5Q96HC4 RBM17P2-201ENST00000616397 1405 ntBASIC20.25■□□□□ 0.83
PDLIM5Q96HC4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.25■□□□□ 0.83
PDLIM5Q96HC4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDLIM5Q96HC4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDLIM5Q96HC4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDLIM5Q96HC4 AC019069.1-201ENST00000610008 1333 ntBASIC20.25■□□□□ 0.83
PDLIM5Q96HC4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDLIM5Q96HC4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PDLIM5Q96HC4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDLIM5Q96HC4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PDLIM5Q96HC4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDLIM5Q96HC4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.24■□□□□ 0.83
PDLIM5Q96HC4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PDLIM5Q96HC4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PDLIM5Q96HC4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDLIM5Q96HC4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDLIM5Q96HC4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.24■□□□□ 0.83
PDLIM5Q96HC4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.24■□□□□ 0.83
PDLIM5Q96HC4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.24■□□□□ 0.83
PDLIM5Q96HC4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.24■□□□□ 0.83
PDLIM5Q96HC4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDLIM5Q96HC4 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.24■□□□□ 0.83
PDLIM5Q96HC4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.24■□□□□ 0.83
PDLIM5Q96HC4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.24■□□□□ 0.83
PDLIM5Q96HC4 AC027702.1-201ENST00000563810 1770 ntBASIC20.23■□□□□ 0.83
PDLIM5Q96HC4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.23■□□□□ 0.83
PDLIM5Q96HC4 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDLIM5Q96HC4 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDLIM5Q96HC4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDLIM5Q96HC4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDLIM5Q96HC4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.23■□□□□ 0.83
PDLIM5Q96HC4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDLIM5Q96HC4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDLIM5Q96HC4 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.23■□□□□ 0.83
PDLIM5Q96HC4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.23■□□□□ 0.83
PDLIM5Q96HC4 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.23■□□□□ 0.83
PDLIM5Q96HC4 NTF6G-201ENST00000591094 616 ntBASIC20.23■□□□□ 0.83
PDLIM5Q96HC4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDLIM5Q96HC4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.23■□□□□ 0.83
PDLIM5Q96HC4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.23■□□□□ 0.83
PDLIM5Q96HC4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDLIM5Q96HC4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PDLIM5Q96HC4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PDLIM5Q96HC4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDLIM5Q96HC4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms