Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
DDX1Q92499 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
DDX1Q92499 AL157384.1-201ENST00000445995 2473 ntBASIC22.12■■□□□ 1.13
DDX1Q92499 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
DDX1Q92499 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC22.11■■□□□ 1.13
DDX1Q92499 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
DDX1Q92499 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC22.11■■□□□ 1.13
DDX1Q92499 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
DDX1Q92499 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
DDX1Q92499 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
DDX1Q92499 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
DDX1Q92499 CDCA4P2-201ENST00000441182 718 ntBASIC22.11■■□□□ 1.13
DDX1Q92499 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC22.11■■□□□ 1.13
DDX1Q92499 AC073111.5-205ENST00000641717 521 ntBASIC22.11■■□□□ 1.13
DDX1Q92499 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
DDX1Q92499 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
DDX1Q92499 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
DDX1Q92499 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
DDX1Q92499 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC22.11■■□□□ 1.13
DDX1Q92499 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
DDX1Q92499 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.11■■□□□ 1.13
DDX1Q92499 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
DDX1Q92499 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
DDX1Q92499 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
DDX1Q92499 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22.1■■□□□ 1.13
DDX1Q92499 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC22.1■■□□□ 1.13
DDX1Q92499 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
DDX1Q92499 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC22.1■■□□□ 1.13
DDX1Q92499 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC22.1■■□□□ 1.13
DDX1Q92499 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
DDX1Q92499 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
DDX1Q92499 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
DDX1Q92499 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC22.1■■□□□ 1.13
DDX1Q92499 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
DDX1Q92499 PPP1R14BP3-201ENST00000509033 445 ntBASIC22.1■■□□□ 1.13
DDX1Q92499 AL109923.1-201ENST00000618799 583 ntBASIC22.1■■□□□ 1.13
DDX1Q92499 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
DDX1Q92499 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
DDX1Q92499 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22.09■■□□□ 1.13
DDX1Q92499 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC22.09■■□□□ 1.13
DDX1Q92499 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
DDX1Q92499 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
DDX1Q92499 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC22.09■■□□□ 1.13
DDX1Q92499 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
DDX1Q92499 AC006970.2-201ENST00000450065 779 ntBASIC22.09■■□□□ 1.13
DDX1Q92499 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC22.09■■□□□ 1.13
DDX1Q92499 KRT18P20-201ENST00000548986 1279 ntBASIC22.09■■□□□ 1.13
DDX1Q92499 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
DDX1Q92499 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC22.09■■□□□ 1.13
DDX1Q92499 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
DDX1Q92499 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
DDX1Q92499 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
DDX1Q92499 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
DDX1Q92499 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
DDX1Q92499 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
DDX1Q92499 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
DDX1Q92499 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
DDX1Q92499 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC22.08■■□□□ 1.13
DDX1Q92499 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
DDX1Q92499 CD99P1-205ENST00000527459 561 ntBASIC22.08■■□□□ 1.13
DDX1Q92499 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.08■■□□□ 1.13
DDX1Q92499 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
DDX1Q92499 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC22.08■■□□□ 1.13
DDX1Q92499 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
DDX1Q92499 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
DDX1Q92499 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
DDX1Q92499 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
DDX1Q92499 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
DDX1Q92499 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC22.07■■□□□ 1.12
DDX1Q92499 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
DDX1Q92499 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
DDX1Q92499 AC011484.1-201ENST00000377652 1995 ntBASIC22.07■■□□□ 1.12
DDX1Q92499 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
DDX1Q92499 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC22.07■■□□□ 1.12
DDX1Q92499 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
DDX1Q92499 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC22.07■■□□□ 1.12
DDX1Q92499 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.07■■□□□ 1.12
DDX1Q92499 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22.07■■□□□ 1.12
DDX1Q92499 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC22.07■■□□□ 1.12
DDX1Q92499 AC137761.2-201ENST00000561729 223 ntBASIC22.07■■□□□ 1.12
DDX1Q92499 AC145350.3-201ENST00000569033 163 ntBASIC22.07■■□□□ 1.12
DDX1Q92499 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC22.07■■□□□ 1.12
DDX1Q92499 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC22.07■■□□□ 1.12
DDX1Q92499 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
DDX1Q92499 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
DDX1Q92499 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
DDX1Q92499 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
DDX1Q92499 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
DDX1Q92499 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC22.06■■□□□ 1.12
DDX1Q92499 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
DDX1Q92499 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
DDX1Q92499 ME2-216ENST00000639850 2331 ntTSL 5 BASIC22.06■■□□□ 1.12
DDX1Q92499 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.06■■□□□ 1.12
DDX1Q92499 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
DDX1Q92499 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC22.06■■□□□ 1.12
DDX1Q92499 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
DDX1Q92499 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
DDX1Q92499 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
DDX1Q92499 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
DDX1Q92499 FEM1AP1-201ENST00000431297 1995 ntBASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms