Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AL359736.2-201ENST00000621992 437 ntBASIC20.85■□□□□ 0.93
HMGB4Q8WW32 FAM197Y4-202ENST00000622692 608 ntBASIC20.85■□□□□ 0.93
HMGB4Q8WW32 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGB4Q8WW32 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HMGB4Q8WW32 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGB4Q8WW32 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGB4Q8WW32 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.85■□□□□ 0.93
HMGB4Q8WW32 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.84■□□□□ 0.93
HMGB4Q8WW32 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HMGB4Q8WW32 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMGB4Q8WW32 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMGB4Q8WW32 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.84■□□□□ 0.93
HMGB4Q8WW32 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
HMGB4Q8WW32 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HMGB4Q8WW32 UBE2SP1-201ENST00000450587 669 ntBASIC20.84■□□□□ 0.93
HMGB4Q8WW32 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMGB4Q8WW32 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.84■□□□□ 0.93
HMGB4Q8WW32 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.84■□□□□ 0.93
HMGB4Q8WW32 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.84■□□□□ 0.93
HMGB4Q8WW32 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMGB4Q8WW32 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
HMGB4Q8WW32 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMGB4Q8WW32 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMGB4Q8WW32 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.83■□□□□ 0.93
HMGB4Q8WW32 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.83■□□□□ 0.93
HMGB4Q8WW32 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.83■□□□□ 0.93
HMGB4Q8WW32 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
HMGB4Q8WW32 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HMGB4Q8WW32 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HMGB4Q8WW32 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HMGB4Q8WW32 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HMGB4Q8WW32 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
HMGB4Q8WW32 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.83■□□□□ 0.93
HMGB4Q8WW32 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.83■□□□□ 0.93
HMGB4Q8WW32 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
HMGB4Q8WW32 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.83■□□□□ 0.93
HMGB4Q8WW32 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.83■□□□□ 0.93
HMGB4Q8WW32 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
HMGB4Q8WW32 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.83■□□□□ 0.92
HMGB4Q8WW32 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.83■□□□□ 0.92
HMGB4Q8WW32 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.82■□□□□ 0.92
HMGB4Q8WW32 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
HMGB4Q8WW32 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGB4Q8WW32 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.82■□□□□ 0.92
HMGB4Q8WW32 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
HMGB4Q8WW32 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGB4Q8WW32 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGB4Q8WW32 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.82■□□□□ 0.92
HMGB4Q8WW32 KRT17P3-201ENST00000420566 1262 ntBASIC20.82■□□□□ 0.92
HMGB4Q8WW32 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.82■□□□□ 0.92
HMGB4Q8WW32 C1QBPP2-201ENST00000528754 825 ntBASIC20.82■□□□□ 0.92
HMGB4Q8WW32 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGB4Q8WW32 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGB4Q8WW32 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HMGB4Q8WW32 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HMGB4Q8WW32 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
HMGB4Q8WW32 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
HMGB4Q8WW32 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HMGB4Q8WW32 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.81■□□□□ 0.92
HMGB4Q8WW32 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMGB4Q8WW32 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMGB4Q8WW32 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMGB4Q8WW32 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HMGB4Q8WW32 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.81■□□□□ 0.92
HMGB4Q8WW32 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMGB4Q8WW32 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.81■□□□□ 0.92
HMGB4Q8WW32 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.81■□□□□ 0.92
HMGB4Q8WW32 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMGB4Q8WW32 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HMGB4Q8WW32 SOX15-203ENST00000570788 1093 ntBASIC20.81■□□□□ 0.92
HMGB4Q8WW32 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HMGB4Q8WW32 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.81■□□□□ 0.92
HMGB4Q8WW32 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.81■□□□□ 0.92
HMGB4Q8WW32 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
HMGB4Q8WW32 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMGB4Q8WW32 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGB4Q8WW32 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGB4Q8WW32 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGB4Q8WW32 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGB4Q8WW32 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGB4Q8WW32 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGB4Q8WW32 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.8■□□□□ 0.92
HMGB4Q8WW32 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.8■□□□□ 0.92
HMGB4Q8WW32 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.8■□□□□ 0.92
HMGB4Q8WW32 RPPH1-201ENST00000516869 333 ntBASIC20.8■□□□□ 0.92
HMGB4Q8WW32 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.8■□□□□ 0.92
HMGB4Q8WW32 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGB4Q8WW32 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGB4Q8WW32 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HMGB4Q8WW32 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HMGB4Q8WW32 CYP21A1P-202ENST00000354927 1481 ntBASIC20.8■□□□□ 0.92
HMGB4Q8WW32 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.8■□□□□ 0.92
HMGB4Q8WW32 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMGB4Q8WW32 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
HMGB4Q8WW32 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.79■□□□□ 0.92
HMGB4Q8WW32 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HMGB4Q8WW32 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HMGB4Q8WW32 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HMGB4Q8WW32 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HMGB4Q8WW32 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms