Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF138Q8WVD3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF138Q8WVD3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF138Q8WVD3 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF138Q8WVD3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF138Q8WVD3 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.86■□□□□ 0.61
RNF138Q8WVD3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.86■□□□□ 0.61
RNF138Q8WVD3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF138Q8WVD3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.86■□□□□ 0.61
RNF138Q8WVD3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF138Q8WVD3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF138Q8WVD3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF138Q8WVD3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
RNF138Q8WVD3 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF138Q8WVD3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
RNF138Q8WVD3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF138Q8WVD3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RNF138Q8WVD3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF138Q8WVD3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
RNF138Q8WVD3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF138Q8WVD3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF138Q8WVD3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
RNF138Q8WVD3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF138Q8WVD3 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
RNF138Q8WVD3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RNF138Q8WVD3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF138Q8WVD3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF138Q8WVD3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF138Q8WVD3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF138Q8WVD3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF138Q8WVD3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.85■□□□□ 0.61
RNF138Q8WVD3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF138Q8WVD3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF138Q8WVD3 AC069236.1-201ENST00000604339 616 ntBASIC18.85■□□□□ 0.61
RNF138Q8WVD3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF138Q8WVD3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RNF138Q8WVD3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF138Q8WVD3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.84■□□□□ 0.61
RNF138Q8WVD3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF138Q8WVD3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF138Q8WVD3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
RNF138Q8WVD3 GUSBP6-202ENST00000438529 1198 ntBASIC18.84■□□□□ 0.61
RNF138Q8WVD3 AC006970.2-201ENST00000450065 779 ntBASIC18.84■□□□□ 0.61
RNF138Q8WVD3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.84■□□□□ 0.61
RNF138Q8WVD3 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF138Q8WVD3 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.84■□□□□ 0.61
RNF138Q8WVD3 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
RNF138Q8WVD3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF138Q8WVD3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RNF138Q8WVD3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF138Q8WVD3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF138Q8WVD3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
RNF138Q8WVD3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF138Q8WVD3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RNF138Q8WVD3 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF138Q8WVD3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF138Q8WVD3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RNF138Q8WVD3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RNF138Q8WVD3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.83■□□□□ 0.61
RNF138Q8WVD3 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.83■□□□□ 0.6
RNF138Q8WVD3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.83■□□□□ 0.6
RNF138Q8WVD3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF138Q8WVD3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
RNF138Q8WVD3 AC121338.2-201ENST00000622535 1744 ntBASIC18.83■□□□□ 0.6
RNF138Q8WVD3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
RNF138Q8WVD3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF138Q8WVD3 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RNF138Q8WVD3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.82■□□□□ 0.6
RNF138Q8WVD3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.82■□□□□ 0.6
RNF138Q8WVD3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.82■□□□□ 0.6
RNF138Q8WVD3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.82■□□□□ 0.6
RNF138Q8WVD3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RNF138Q8WVD3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.82■□□□□ 0.6
RNF138Q8WVD3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RNF138Q8WVD3 AL121832.2-201ENST00000610979 668 ntBASIC18.82■□□□□ 0.6
RNF138Q8WVD3 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RNF138Q8WVD3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF138Q8WVD3 AC005229.4-201ENST00000610085 2198 ntBASIC18.82■□□□□ 0.6
RNF138Q8WVD3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF138Q8WVD3 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RNF138Q8WVD3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF138Q8WVD3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF138Q8WVD3 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF138Q8WVD3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.81■□□□□ 0.6
RNF138Q8WVD3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF138Q8WVD3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF138Q8WVD3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF138Q8WVD3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.81■□□□□ 0.6
RNF138Q8WVD3 AC093787.1-201ENST00000450396 207 ntBASIC18.81■□□□□ 0.6
RNF138Q8WVD3 AF201337.1-201ENST00000520239 748 ntBASIC18.81■□□□□ 0.6
RNF138Q8WVD3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.81■□□□□ 0.6
RNF138Q8WVD3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF138Q8WVD3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF138Q8WVD3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RNF138Q8WVD3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF138Q8WVD3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RNF138Q8WVD3 PLK5-205ENST00000642079 1969 ntBASIC18.81■□□□□ 0.6
RNF138Q8WVD3 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF138Q8WVD3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF138Q8WVD3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms