Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LPCAT1Q8NF37 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.92■□□□□ 0.94
LPCAT1Q8NF37 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LPCAT1Q8NF37 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LPCAT1Q8NF37 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LPCAT1Q8NF37 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.92■□□□□ 0.94
LPCAT1Q8NF37 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.92■□□□□ 0.94
LPCAT1Q8NF37 TERF1P5-201ENST00000477545 1207 ntBASIC20.92■□□□□ 0.94
LPCAT1Q8NF37 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.92■□□□□ 0.94
LPCAT1Q8NF37 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.92■□□□□ 0.94
LPCAT1Q8NF37 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LPCAT1Q8NF37 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LPCAT1Q8NF37 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LPCAT1Q8NF37 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LPCAT1Q8NF37 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
LPCAT1Q8NF37 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.91■□□□□ 0.94
LPCAT1Q8NF37 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LPCAT1Q8NF37 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
LPCAT1Q8NF37 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
LPCAT1Q8NF37 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.91■□□□□ 0.94
LPCAT1Q8NF37 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.91■□□□□ 0.94
LPCAT1Q8NF37 AC243732.1-201ENST00000612648 864 ntBASIC20.91■□□□□ 0.94
LPCAT1Q8NF37 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.91■□□□□ 0.94
LPCAT1Q8NF37 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.9■□□□□ 0.94
LPCAT1Q8NF37 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.9■□□□□ 0.94
LPCAT1Q8NF37 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LPCAT1Q8NF37 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LPCAT1Q8NF37 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.9■□□□□ 0.94
LPCAT1Q8NF37 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.9■□□□□ 0.94
LPCAT1Q8NF37 DUX4L16-201ENST00000555130 1264 ntBASIC20.9■□□□□ 0.94
LPCAT1Q8NF37 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
LPCAT1Q8NF37 AC080038.1-201ENST00000611274 1154 ntBASIC20.9■□□□□ 0.94
LPCAT1Q8NF37 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
LPCAT1Q8NF37 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.9■□□□□ 0.94
LPCAT1Q8NF37 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LPCAT1Q8NF37 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.9■□□□□ 0.94
LPCAT1Q8NF37 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LPCAT1Q8NF37 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LPCAT1Q8NF37 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.9■□□□□ 0.94
LPCAT1Q8NF37 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
LPCAT1Q8NF37 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
LPCAT1Q8NF37 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.94
LPCAT1Q8NF37 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
LPCAT1Q8NF37 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.89■□□□□ 0.94
LPCAT1Q8NF37 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LPCAT1Q8NF37 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
LPCAT1Q8NF37 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.89■□□□□ 0.93
LPCAT1Q8NF37 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.89■□□□□ 0.93
LPCAT1Q8NF37 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.89■□□□□ 0.93
LPCAT1Q8NF37 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.89■□□□□ 0.93
LPCAT1Q8NF37 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.89■□□□□ 0.93
LPCAT1Q8NF37 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
LPCAT1Q8NF37 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
LPCAT1Q8NF37 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LPCAT1Q8NF37 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LPCAT1Q8NF37 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LPCAT1Q8NF37 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LPCAT1Q8NF37 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.89■□□□□ 0.93
LPCAT1Q8NF37 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LPCAT1Q8NF37 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LPCAT1Q8NF37 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LPCAT1Q8NF37 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LPCAT1Q8NF37 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
LPCAT1Q8NF37 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LPCAT1Q8NF37 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LPCAT1Q8NF37 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
LPCAT1Q8NF37 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.88■□□□□ 0.93
LPCAT1Q8NF37 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LPCAT1Q8NF37 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.88■□□□□ 0.93
LPCAT1Q8NF37 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.88■□□□□ 0.93
LPCAT1Q8NF37 AC013268.1-206ENST00000638368 961 ntBASIC20.88■□□□□ 0.93
LPCAT1Q8NF37 AC112229.1-201ENST00000639295 961 ntBASIC20.88■□□□□ 0.93
LPCAT1Q8NF37 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LPCAT1Q8NF37 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LPCAT1Q8NF37 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.87■□□□□ 0.93
LPCAT1Q8NF37 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LPCAT1Q8NF37 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LPCAT1Q8NF37 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
LPCAT1Q8NF37 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
LPCAT1Q8NF37 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LPCAT1Q8NF37 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.87■□□□□ 0.93
LPCAT1Q8NF37 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LPCAT1Q8NF37 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LPCAT1Q8NF37 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.87■□□□□ 0.93
LPCAT1Q8NF37 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.87■□□□□ 0.93
LPCAT1Q8NF37 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.87■□□□□ 0.93
LPCAT1Q8NF37 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.87■□□□□ 0.93
LPCAT1Q8NF37 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LPCAT1Q8NF37 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LPCAT1Q8NF37 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
LPCAT1Q8NF37 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.87■□□□□ 0.93
LPCAT1Q8NF37 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.87■□□□□ 0.93
LPCAT1Q8NF37 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
LPCAT1Q8NF37 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LPCAT1Q8NF37 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LPCAT1Q8NF37 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
LPCAT1Q8NF37 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LPCAT1Q8NF37 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LPCAT1Q8NF37 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LPCAT1Q8NF37 AC091799.1-201ENST00000422823 811 ntBASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms