Protein–RNA interactions for Protein: Q8N9V2

TRIML1, Probable E3 ubiquitin-protein ligase TRIML1, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML1Q8N9V2 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRIML1Q8N9V2 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRIML1Q8N9V2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC23.08■■□□□ 1.29
TRIML1Q8N9V2 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TRIML1Q8N9V2 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
TRIML1Q8N9V2 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TRIML1Q8N9V2 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
TRIML1Q8N9V2 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TRIML1Q8N9V2 POU5F1P4-201ENST00000413175 1085 ntBASIC23.08■■□□□ 1.29
TRIML1Q8N9V2 AC092666.2-201ENST00000613287 246 ntBASIC23.08■■□□□ 1.29
TRIML1Q8N9V2 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TRIML1Q8N9V2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
TRIML1Q8N9V2 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
TRIML1Q8N9V2 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TRIML1Q8N9V2 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC23.08■■□□□ 1.28
TRIML1Q8N9V2 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRIML1Q8N9V2 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
TRIML1Q8N9V2 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRIML1Q8N9V2 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
TRIML1Q8N9V2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.07■■□□□ 1.28
TRIML1Q8N9V2 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC23.07■■□□□ 1.28
TRIML1Q8N9V2 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC23.07■■□□□ 1.28
TRIML1Q8N9V2 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.07■■□□□ 1.28
TRIML1Q8N9V2 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TRIML1Q8N9V2 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC23.07■■□□□ 1.28
TRIML1Q8N9V2 FP700111.2-201ENST00000619190 1892 ntBASIC23.07■■□□□ 1.28
TRIML1Q8N9V2 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRIML1Q8N9V2 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC23.06■■□□□ 1.28
TRIML1Q8N9V2 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRIML1Q8N9V2 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRIML1Q8N9V2 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TRIML1Q8N9V2 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC23.06■■□□□ 1.28
TRIML1Q8N9V2 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC23.06■■□□□ 1.28
TRIML1Q8N9V2 AC026271.2-201ENST00000428091 497 ntBASIC23.06■■□□□ 1.28
TRIML1Q8N9V2 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TRIML1Q8N9V2 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRIML1Q8N9V2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TRIML1Q8N9V2 AC008175.2-201ENST00000612840 297 ntBASIC23.06■■□□□ 1.28
TRIML1Q8N9V2 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.06■■□□□ 1.28
TRIML1Q8N9V2 AL358852.1-201ENST00000623174 1268 ntBASIC23.06■■□□□ 1.28
TRIML1Q8N9V2 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRIML1Q8N9V2 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
TRIML1Q8N9V2 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRIML1Q8N9V2 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TRIML1Q8N9V2 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC23.06■■□□□ 1.28
TRIML1Q8N9V2 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRIML1Q8N9V2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRIML1Q8N9V2 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TRIML1Q8N9V2 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
TRIML1Q8N9V2 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRIML1Q8N9V2 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRIML1Q8N9V2 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRIML1Q8N9V2 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRIML1Q8N9V2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TRIML1Q8N9V2 NT5C3AP1-201ENST00000394500 1012 ntBASIC23.05■■□□□ 1.28
TRIML1Q8N9V2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.05■■□□□ 1.28
TRIML1Q8N9V2 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.05■■□□□ 1.28
TRIML1Q8N9V2 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRIML1Q8N9V2 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRIML1Q8N9V2 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
TRIML1Q8N9V2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC23.05■■□□□ 1.28
TRIML1Q8N9V2 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRIML1Q8N9V2 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRIML1Q8N9V2 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRIML1Q8N9V2 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC23.05■■□□□ 1.28
TRIML1Q8N9V2 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRIML1Q8N9V2 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRIML1Q8N9V2 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TRIML1Q8N9V2 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRIML1Q8N9V2 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRIML1Q8N9V2 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRIML1Q8N9V2 AL162377.1-201ENST00000618844 1793 ntBASIC23.04■■□□□ 1.28
TRIML1Q8N9V2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC23.04■■□□□ 1.28
TRIML1Q8N9V2 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
TRIML1Q8N9V2 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TRIML1Q8N9V2 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRIML1Q8N9V2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRIML1Q8N9V2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC23.04■■□□□ 1.28
TRIML1Q8N9V2 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC23.04■■□□□ 1.28
TRIML1Q8N9V2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.04■■□□□ 1.28
TRIML1Q8N9V2 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC23.04■■□□□ 1.28
TRIML1Q8N9V2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
TRIML1Q8N9V2 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TRIML1Q8N9V2 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC23.03■■□□□ 1.28
TRIML1Q8N9V2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIML1Q8N9V2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIML1Q8N9V2 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIML1Q8N9V2 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TRIML1Q8N9V2 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIML1Q8N9V2 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
TRIML1Q8N9V2 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.03■■□□□ 1.28
TRIML1Q8N9V2 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TRIML1Q8N9V2 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC23.03■■□□□ 1.28
TRIML1Q8N9V2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.03■■□□□ 1.28
TRIML1Q8N9V2 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
TRIML1Q8N9V2 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIML1Q8N9V2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIML1Q8N9V2 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIML1Q8N9V2 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC23.03■■□□□ 1.28
TRIML1Q8N9V2 KRT87P-202ENST00000534226 1464 ntBASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms