Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.42■□□□□ 0.54
CNEP1R1Q8N9A8 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CNEP1R1Q8N9A8 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.42■□□□□ 0.54
CNEP1R1Q8N9A8 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNEP1R1Q8N9A8 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNEP1R1Q8N9A8 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNEP1R1Q8N9A8 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNEP1R1Q8N9A8 AC010980.2-201ENST00000587099 1412 ntBASIC18.41■□□□□ 0.54
CNEP1R1Q8N9A8 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CNEP1R1Q8N9A8 AC012676.1-201ENST00000574705 1949 ntBASIC18.41■□□□□ 0.54
CNEP1R1Q8N9A8 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNEP1R1Q8N9A8 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CNEP1R1Q8N9A8 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNEP1R1Q8N9A8 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNEP1R1Q8N9A8 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.41■□□□□ 0.54
CNEP1R1Q8N9A8 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.41■□□□□ 0.54
CNEP1R1Q8N9A8 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.41■□□□□ 0.54
CNEP1R1Q8N9A8 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.41■□□□□ 0.54
CNEP1R1Q8N9A8 KRT18P6-201ENST00000555540 1265 ntBASIC18.41■□□□□ 0.54
CNEP1R1Q8N9A8 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNEP1R1Q8N9A8 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.41■□□□□ 0.54
CNEP1R1Q8N9A8 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNEP1R1Q8N9A8 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.41■□□□□ 0.54
CNEP1R1Q8N9A8 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNEP1R1Q8N9A8 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.41■□□□□ 0.54
CNEP1R1Q8N9A8 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.41■□□□□ 0.54
CNEP1R1Q8N9A8 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNEP1R1Q8N9A8 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNEP1R1Q8N9A8 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
CNEP1R1Q8N9A8 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CNEP1R1Q8N9A8 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNEP1R1Q8N9A8 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNEP1R1Q8N9A8 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNEP1R1Q8N9A8 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.4■□□□□ 0.54
CNEP1R1Q8N9A8 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.4■□□□□ 0.54
CNEP1R1Q8N9A8 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.4■□□□□ 0.54
CNEP1R1Q8N9A8 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CNEP1R1Q8N9A8 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNEP1R1Q8N9A8 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
CNEP1R1Q8N9A8 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CNEP1R1Q8N9A8 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CNEP1R1Q8N9A8 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.39■□□□□ 0.54
CNEP1R1Q8N9A8 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
CNEP1R1Q8N9A8 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNEP1R1Q8N9A8 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNEP1R1Q8N9A8 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNEP1R1Q8N9A8 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CNEP1R1Q8N9A8 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.39■□□□□ 0.53
CNEP1R1Q8N9A8 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CNEP1R1Q8N9A8 AC073210.2-201ENST00000430369 194 ntBASIC18.39■□□□□ 0.53
CNEP1R1Q8N9A8 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.39■□□□□ 0.53
CNEP1R1Q8N9A8 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.39■□□□□ 0.53
CNEP1R1Q8N9A8 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNEP1R1Q8N9A8 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNEP1R1Q8N9A8 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNEP1R1Q8N9A8 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CNEP1R1Q8N9A8 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CNEP1R1Q8N9A8 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.38■□□□□ 0.53
CNEP1R1Q8N9A8 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNEP1R1Q8N9A8 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNEP1R1Q8N9A8 EP400NL-214ENST00000641289 2402 ntBASIC18.38■□□□□ 0.53
CNEP1R1Q8N9A8 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNEP1R1Q8N9A8 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CNEP1R1Q8N9A8 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNEP1R1Q8N9A8 FAM21FP-204ENST00000608637 956 ntBASIC18.38■□□□□ 0.53
CNEP1R1Q8N9A8 AC092118.2-201ENST00000613495 667 ntBASIC18.38■□□□□ 0.53
CNEP1R1Q8N9A8 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNEP1R1Q8N9A8 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNEP1R1Q8N9A8 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNEP1R1Q8N9A8 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CNEP1R1Q8N9A8 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNEP1R1Q8N9A8 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNEP1R1Q8N9A8 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNEP1R1Q8N9A8 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNEP1R1Q8N9A8 FBXW4P1-201ENST00000426721 2239 ntBASIC18.37■□□□□ 0.53
CNEP1R1Q8N9A8 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CNEP1R1Q8N9A8 LSM12P1-201ENST00000411836 588 ntBASIC18.37■□□□□ 0.53
CNEP1R1Q8N9A8 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.37■□□□□ 0.53
CNEP1R1Q8N9A8 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.37■□□□□ 0.53
CNEP1R1Q8N9A8 AC007322.3-201ENST00000426526 701 ntBASIC18.37■□□□□ 0.53
CNEP1R1Q8N9A8 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.37■□□□□ 0.53
CNEP1R1Q8N9A8 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.37■□□□□ 0.53
CNEP1R1Q8N9A8 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.37■□□□□ 0.53
CNEP1R1Q8N9A8 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.37■□□□□ 0.53
CNEP1R1Q8N9A8 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.37■□□□□ 0.53
CNEP1R1Q8N9A8 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.37■□□□□ 0.53
CNEP1R1Q8N9A8 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.37■□□□□ 0.53
CNEP1R1Q8N9A8 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNEP1R1Q8N9A8 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CNEP1R1Q8N9A8 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNEP1R1Q8N9A8 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNEP1R1Q8N9A8 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNEP1R1Q8N9A8 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CNEP1R1Q8N9A8 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CNEP1R1Q8N9A8 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.37■□□□□ 0.53
CNEP1R1Q8N9A8 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNEP1R1Q8N9A8 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.37■□□□□ 0.53
CNEP1R1Q8N9A8 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNEP1R1Q8N9A8 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNEP1R1Q8N9A8 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms