Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC116Q8IYX3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC116Q8IYX3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC116Q8IYX3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC116Q8IYX3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC116Q8IYX3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC116Q8IYX3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC116Q8IYX3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.52■□□□□ 0.72
CCDC116Q8IYX3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CCDC116Q8IYX3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC116Q8IYX3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
CCDC116Q8IYX3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC116Q8IYX3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC116Q8IYX3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC116Q8IYX3 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC116Q8IYX3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC116Q8IYX3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.51■□□□□ 0.71
CCDC116Q8IYX3 RARRES2P11-201ENST00000635158 484 ntBASIC19.51■□□□□ 0.71
CCDC116Q8IYX3 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC116Q8IYX3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CCDC116Q8IYX3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC116Q8IYX3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC116Q8IYX3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC116Q8IYX3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC116Q8IYX3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC116Q8IYX3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC116Q8IYX3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC116Q8IYX3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC116Q8IYX3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC116Q8IYX3 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC116Q8IYX3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC116Q8IYX3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CCDC116Q8IYX3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC116Q8IYX3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.5■□□□□ 0.71
CCDC116Q8IYX3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC116Q8IYX3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC116Q8IYX3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC116Q8IYX3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.5■□□□□ 0.71
CCDC116Q8IYX3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC116Q8IYX3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC116Q8IYX3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC116Q8IYX3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC116Q8IYX3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC116Q8IYX3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.5■□□□□ 0.71
CCDC116Q8IYX3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC116Q8IYX3 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CCDC116Q8IYX3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
CCDC116Q8IYX3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC116Q8IYX3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CCDC116Q8IYX3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CCDC116Q8IYX3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC116Q8IYX3 AC006128.1-201ENST00000624704 1661 ntBASIC19.49■□□□□ 0.71
CCDC116Q8IYX3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC116Q8IYX3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC116Q8IYX3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC116Q8IYX3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC116Q8IYX3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CCDC116Q8IYX3 KRT18P5-201ENST00000436075 1291 ntBASIC19.49■□□□□ 0.71
CCDC116Q8IYX3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC116Q8IYX3 AC245052.3-201ENST00000450182 901 ntBASIC19.49■□□□□ 0.71
CCDC116Q8IYX3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.49■□□□□ 0.71
CCDC116Q8IYX3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.49■□□□□ 0.71
CCDC116Q8IYX3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC116Q8IYX3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC116Q8IYX3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC116Q8IYX3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC116Q8IYX3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC116Q8IYX3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
CCDC116Q8IYX3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CCDC116Q8IYX3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC116Q8IYX3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CCDC116Q8IYX3 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC116Q8IYX3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC116Q8IYX3 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC116Q8IYX3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC116Q8IYX3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC116Q8IYX3 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC116Q8IYX3 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC116Q8IYX3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC116Q8IYX3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC116Q8IYX3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC116Q8IYX3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC116Q8IYX3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.48■□□□□ 0.71
CCDC116Q8IYX3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC116Q8IYX3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.48■□□□□ 0.71
CCDC116Q8IYX3 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CCDC116Q8IYX3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC116Q8IYX3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC116Q8IYX3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC116Q8IYX3 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC116Q8IYX3 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CCDC116Q8IYX3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC116Q8IYX3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC116Q8IYX3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC116Q8IYX3 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.47■□□□□ 0.71
CCDC116Q8IYX3 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC116Q8IYX3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.47■□□□□ 0.71
CCDC116Q8IYX3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
CCDC116Q8IYX3 UBE2DNL-204ENST00000602536 740 ntBASIC19.47■□□□□ 0.71
CCDC116Q8IYX3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms