Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF440Q8IYI8 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF440Q8IYI8 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF440Q8IYI8 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF440Q8IYI8 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF440Q8IYI8 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF440Q8IYI8 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF440Q8IYI8 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF440Q8IYI8 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF440Q8IYI8 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF440Q8IYI8 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF440Q8IYI8 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.93■□□□□ 0.62
ZNF440Q8IYI8 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF440Q8IYI8 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.93■□□□□ 0.62
ZNF440Q8IYI8 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF440Q8IYI8 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.93■□□□□ 0.62
ZNF440Q8IYI8 AC243732.1-201ENST00000612648 864 ntBASIC18.93■□□□□ 0.62
ZNF440Q8IYI8 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.93■□□□□ 0.62
ZNF440Q8IYI8 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF440Q8IYI8 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
ZNF440Q8IYI8 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF440Q8IYI8 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF440Q8IYI8 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
ZNF440Q8IYI8 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.93■□□□□ 0.62
ZNF440Q8IYI8 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF440Q8IYI8 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF440Q8IYI8 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF440Q8IYI8 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF440Q8IYI8 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF440Q8IYI8 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF440Q8IYI8 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF440Q8IYI8 MIR6821-201ENST00000617625 74 ntBASIC18.92■□□□□ 0.62
ZNF440Q8IYI8 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF440Q8IYI8 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF440Q8IYI8 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF440Q8IYI8 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.92■□□□□ 0.62
ZNF440Q8IYI8 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF440Q8IYI8 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF440Q8IYI8 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.92■□□□□ 0.62
ZNF440Q8IYI8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
ZNF440Q8IYI8 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.91■□□□□ 0.62
ZNF440Q8IYI8 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.91■□□□□ 0.62
ZNF440Q8IYI8 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF440Q8IYI8 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
ZNF440Q8IYI8 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF440Q8IYI8 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF440Q8IYI8 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF440Q8IYI8 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
ZNF440Q8IYI8 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF440Q8IYI8 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF440Q8IYI8 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF440Q8IYI8 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.91■□□□□ 0.62
ZNF440Q8IYI8 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.91■□□□□ 0.62
ZNF440Q8IYI8 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF440Q8IYI8 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
ZNF440Q8IYI8 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF440Q8IYI8 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
ZNF440Q8IYI8 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF440Q8IYI8 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
ZNF440Q8IYI8 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.9■□□□□ 0.62
ZNF440Q8IYI8 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.9■□□□□ 0.62
ZNF440Q8IYI8 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF440Q8IYI8 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF440Q8IYI8 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF440Q8IYI8 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF440Q8IYI8 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF440Q8IYI8 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.9■□□□□ 0.62
ZNF440Q8IYI8 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.9■□□□□ 0.62
ZNF440Q8IYI8 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.9■□□□□ 0.62
ZNF440Q8IYI8 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
ZNF440Q8IYI8 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF440Q8IYI8 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
ZNF440Q8IYI8 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF440Q8IYI8 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
ZNF440Q8IYI8 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF440Q8IYI8 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ZNF440Q8IYI8 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.89■□□□□ 0.61
ZNF440Q8IYI8 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.89■□□□□ 0.61
ZNF440Q8IYI8 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF440Q8IYI8 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
ZNF440Q8IYI8 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF440Q8IYI8 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF440Q8IYI8 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
ZNF440Q8IYI8 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF440Q8IYI8 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.89■□□□□ 0.61
ZNF440Q8IYI8 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF440Q8IYI8 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.89■□□□□ 0.61
ZNF440Q8IYI8 NTF6G-201ENST00000591094 616 ntBASIC18.89■□□□□ 0.61
ZNF440Q8IYI8 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF440Q8IYI8 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF440Q8IYI8 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF440Q8IYI8 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF440Q8IYI8 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF440Q8IYI8 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.89■□□□□ 0.61
ZNF440Q8IYI8 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
ZNF440Q8IYI8 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF440Q8IYI8 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
ZNF440Q8IYI8 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF440Q8IYI8 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF440Q8IYI8 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms