Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SMC5Q8IY18 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SMC5Q8IY18 SLC7A5P2-201ENST00000553010 536 ntBASIC25.73■■□□□ 1.71
SMC5Q8IY18 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC25.73■■□□□ 1.71
SMC5Q8IY18 AP001160.3-201ENST00000601484 763 ntBASIC25.73■■□□□ 1.71
SMC5Q8IY18 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
SMC5Q8IY18 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
SMC5Q8IY18 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC25.72■■□□□ 1.71
SMC5Q8IY18 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
SMC5Q8IY18 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC25.72■■□□□ 1.71
SMC5Q8IY18 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SMC5Q8IY18 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
SMC5Q8IY18 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC25.72■■□□□ 1.71
SMC5Q8IY18 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SMC5Q8IY18 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC25.72■■□□□ 1.71
SMC5Q8IY18 KRT18P61-201ENST00000585825 1298 ntBASIC25.72■■□□□ 1.71
SMC5Q8IY18 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC25.72■■□□□ 1.71
SMC5Q8IY18 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC25.72■■□□□ 1.71
SMC5Q8IY18 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC25.72■■□□□ 1.71
SMC5Q8IY18 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
SMC5Q8IY18 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SMC5Q8IY18 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SMC5Q8IY18 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC25.71■■□□□ 1.71
SMC5Q8IY18 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC25.71■■□□□ 1.71
SMC5Q8IY18 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
SMC5Q8IY18 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC25.71■■□□□ 1.71
SMC5Q8IY18 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SMC5Q8IY18 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
SMC5Q8IY18 AC020907.5-201ENST00000624372 1936 ntBASIC25.71■■□□□ 1.71
SMC5Q8IY18 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC25.7■■□□□ 1.71
SMC5Q8IY18 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC25.7■■□□□ 1.71
SMC5Q8IY18 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC25.7■■□□□ 1.71
SMC5Q8IY18 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
SMC5Q8IY18 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SMC5Q8IY18 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SMC5Q8IY18 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SMC5Q8IY18 KRT18P14-201ENST00000534205 1250 ntBASIC25.7■■□□□ 1.7
SMC5Q8IY18 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC25.7■■□□□ 1.7
SMC5Q8IY18 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
SMC5Q8IY18 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SMC5Q8IY18 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
SMC5Q8IY18 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC25.7■■□□□ 1.7
SMC5Q8IY18 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
SMC5Q8IY18 FP700111.2-201ENST00000619190 1892 ntBASIC25.7■■□□□ 1.7
SMC5Q8IY18 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SMC5Q8IY18 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SMC5Q8IY18 AC004854.2-201ENST00000608450 1441 ntBASIC25.7■■□□□ 1.7
SMC5Q8IY18 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SMC5Q8IY18 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SMC5Q8IY18 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
SMC5Q8IY18 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC25.69■■□□□ 1.7
SMC5Q8IY18 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SMC5Q8IY18 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
SMC5Q8IY18 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SMC5Q8IY18 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
SMC5Q8IY18 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC25.69■■□□□ 1.7
SMC5Q8IY18 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SMC5Q8IY18 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC25.69■■□□□ 1.7
SMC5Q8IY18 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC25.69■■□□□ 1.7
SMC5Q8IY18 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SMC5Q8IY18 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SMC5Q8IY18 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SMC5Q8IY18 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SMC5Q8IY18 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SMC5Q8IY18 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC25.68■■□□□ 1.7
SMC5Q8IY18 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC25.68■■□□□ 1.7
SMC5Q8IY18 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SMC5Q8IY18 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC25.68■■□□□ 1.7
SMC5Q8IY18 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC25.68■■□□□ 1.7
SMC5Q8IY18 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC25.68■■□□□ 1.7
SMC5Q8IY18 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
SMC5Q8IY18 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC25.68■■□□□ 1.7
SMC5Q8IY18 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC25.68■■□□□ 1.7
SMC5Q8IY18 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SMC5Q8IY18 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC25.68■■□□□ 1.7
SMC5Q8IY18 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SMC5Q8IY18 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SMC5Q8IY18 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SMC5Q8IY18 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC25.68■■□□□ 1.7
SMC5Q8IY18 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
SMC5Q8IY18 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SMC5Q8IY18 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC25.67■■□□□ 1.7
SMC5Q8IY18 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SMC5Q8IY18 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC25.67■■□□□ 1.7
SMC5Q8IY18 AC245052.3-201ENST00000450182 901 ntBASIC25.67■■□□□ 1.7
SMC5Q8IY18 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SMC5Q8IY18 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC25.67■■□□□ 1.7
SMC5Q8IY18 KRT18P20-201ENST00000548986 1279 ntBASIC25.67■■□□□ 1.7
SMC5Q8IY18 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC25.67■■□□□ 1.7
SMC5Q8IY18 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SMC5Q8IY18 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC25.67■■□□□ 1.7
SMC5Q8IY18 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC25.67■■□□□ 1.7
SMC5Q8IY18 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SMC5Q8IY18 STAC-204ENST00000457375 1366 ntTSL 2 BASIC25.67■■□□□ 1.7
SMC5Q8IY18 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC25.66■■□□□ 1.7
SMC5Q8IY18 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SMC5Q8IY18 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SMC5Q8IY18 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
SMC5Q8IY18 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SMC5Q8IY18 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms