Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM48Q8IWZ4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM48Q8IWZ4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM48Q8IWZ4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.32■□□□□ 0.84
TRIM48Q8IWZ4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
TRIM48Q8IWZ4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.32■□□□□ 0.84
TRIM48Q8IWZ4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM48Q8IWZ4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM48Q8IWZ4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TRIM48Q8IWZ4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM48Q8IWZ4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM48Q8IWZ4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM48Q8IWZ4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.31■□□□□ 0.84
TRIM48Q8IWZ4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM48Q8IWZ4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM48Q8IWZ4 AC133552.2-202ENST00000575694 574 ntBASIC20.31■□□□□ 0.84
TRIM48Q8IWZ4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM48Q8IWZ4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
TRIM48Q8IWZ4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM48Q8IWZ4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM48Q8IWZ4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.31■□□□□ 0.84
TRIM48Q8IWZ4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM48Q8IWZ4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM48Q8IWZ4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM48Q8IWZ4 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM48Q8IWZ4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM48Q8IWZ4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM48Q8IWZ4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM48Q8IWZ4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
TRIM48Q8IWZ4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM48Q8IWZ4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM48Q8IWZ4 TSPY6P-201ENST00000448518 926 ntBASIC20.3■□□□□ 0.84
TRIM48Q8IWZ4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.3■□□□□ 0.84
TRIM48Q8IWZ4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
TRIM48Q8IWZ4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM48Q8IWZ4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.3■□□□□ 0.84
TRIM48Q8IWZ4 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TRIM48Q8IWZ4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
TRIM48Q8IWZ4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM48Q8IWZ4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM48Q8IWZ4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM48Q8IWZ4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM48Q8IWZ4 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM48Q8IWZ4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TRIM48Q8IWZ4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM48Q8IWZ4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM48Q8IWZ4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.29■□□□□ 0.84
TRIM48Q8IWZ4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
TRIM48Q8IWZ4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM48Q8IWZ4 OR10C1-204ENST00000622521 1039 ntBASIC20.29■□□□□ 0.84
TRIM48Q8IWZ4 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.29■□□□□ 0.84
TRIM48Q8IWZ4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM48Q8IWZ4 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM48Q8IWZ4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM48Q8IWZ4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
TRIM48Q8IWZ4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM48Q8IWZ4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TRIM48Q8IWZ4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.28■□□□□ 0.84
TRIM48Q8IWZ4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM48Q8IWZ4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM48Q8IWZ4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM48Q8IWZ4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM48Q8IWZ4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.28■□□□□ 0.84
TRIM48Q8IWZ4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TRIM48Q8IWZ4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.28■□□□□ 0.84
TRIM48Q8IWZ4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM48Q8IWZ4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM48Q8IWZ4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TRIM48Q8IWZ4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.27■□□□□ 0.84
TRIM48Q8IWZ4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.27■□□□□ 0.84
TRIM48Q8IWZ4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.27■□□□□ 0.84
TRIM48Q8IWZ4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM48Q8IWZ4 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM48Q8IWZ4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.27■□□□□ 0.84
TRIM48Q8IWZ4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM48Q8IWZ4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.27■□□□□ 0.84
TRIM48Q8IWZ4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.27■□□□□ 0.84
TRIM48Q8IWZ4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM48Q8IWZ4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM48Q8IWZ4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM48Q8IWZ4 CDV3P1-201ENST00000471403 739 ntBASIC20.27■□□□□ 0.84
TRIM48Q8IWZ4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM48Q8IWZ4 AL162412.1-201ENST00000567129 965 ntBASIC20.27■□□□□ 0.84
TRIM48Q8IWZ4 AC016405.3-201ENST00000607710 860 ntBASIC20.27■□□□□ 0.84
TRIM48Q8IWZ4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
TRIM48Q8IWZ4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.27■□□□□ 0.84
TRIM48Q8IWZ4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TRIM48Q8IWZ4 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TRIM48Q8IWZ4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM48Q8IWZ4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.27■□□□□ 0.83
TRIM48Q8IWZ4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRIM48Q8IWZ4 MKRN4P-201ENST00000444706 1521 ntBASIC20.27■□□□□ 0.83
TRIM48Q8IWZ4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.83
TRIM48Q8IWZ4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TRIM48Q8IWZ4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TRIM48Q8IWZ4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.26■□□□□ 0.83
TRIM48Q8IWZ4 AIRN-201ENST00000601203 4374 ntBASIC20.26■□□□□ 0.83
TRIM48Q8IWZ4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.26■□□□□ 0.83
TRIM48Q8IWZ4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM48Q8IWZ4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms