Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
CRLF3Q8IUI8 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CRLF3Q8IUI8 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CRLF3Q8IUI8 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CRLF3Q8IUI8 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.64■□□□□ 0.89
CRLF3Q8IUI8 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CRLF3Q8IUI8 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.64■□□□□ 0.89
CRLF3Q8IUI8 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CRLF3Q8IUI8 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CRLF3Q8IUI8 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.64■□□□□ 0.89
CRLF3Q8IUI8 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CRLF3Q8IUI8 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CRLF3Q8IUI8 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CRLF3Q8IUI8 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CRLF3Q8IUI8 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CRLF3Q8IUI8 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CRLF3Q8IUI8 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CRLF3Q8IUI8 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CRLF3Q8IUI8 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CRLF3Q8IUI8 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.64■□□□□ 0.89
CRLF3Q8IUI8 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.64■□□□□ 0.89
CRLF3Q8IUI8 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CRLF3Q8IUI8 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.63■□□□□ 0.89
CRLF3Q8IUI8 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.63■□□□□ 0.89
CRLF3Q8IUI8 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CRLF3Q8IUI8 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CRLF3Q8IUI8 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.63■□□□□ 0.89
CRLF3Q8IUI8 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CRLF3Q8IUI8 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.63■□□□□ 0.89
CRLF3Q8IUI8 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CRLF3Q8IUI8 AL391422.3-201ENST00000603791 2761 ntBASIC20.63■□□□□ 0.89
CRLF3Q8IUI8 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CRLF3Q8IUI8 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.62■□□□□ 0.89
CRLF3Q8IUI8 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CRLF3Q8IUI8 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CRLF3Q8IUI8 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CRLF3Q8IUI8 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.62■□□□□ 0.89
CRLF3Q8IUI8 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.62■□□□□ 0.89
CRLF3Q8IUI8 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CRLF3Q8IUI8 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.62■□□□□ 0.89
CRLF3Q8IUI8 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CRLF3Q8IUI8 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CRLF3Q8IUI8 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CRLF3Q8IUI8 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.62■□□□□ 0.89
CRLF3Q8IUI8 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CRLF3Q8IUI8 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
CRLF3Q8IUI8 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CRLF3Q8IUI8 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CRLF3Q8IUI8 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CRLF3Q8IUI8 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CRLF3Q8IUI8 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CRLF3Q8IUI8 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CRLF3Q8IUI8 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.61■□□□□ 0.89
CRLF3Q8IUI8 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CRLF3Q8IUI8 RARRES2P6-201ENST00000567333 442 ntBASIC20.61■□□□□ 0.89
CRLF3Q8IUI8 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CRLF3Q8IUI8 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CRLF3Q8IUI8 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.61■□□□□ 0.89
CRLF3Q8IUI8 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CRLF3Q8IUI8 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CRLF3Q8IUI8 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CRLF3Q8IUI8 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
CRLF3Q8IUI8 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CRLF3Q8IUI8 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.6■□□□□ 0.89
CRLF3Q8IUI8 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
CRLF3Q8IUI8 SLC47A1P1-202ENST00000449666 945 ntBASIC20.6■□□□□ 0.89
CRLF3Q8IUI8 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CRLF3Q8IUI8 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CRLF3Q8IUI8 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.6■□□□□ 0.89
CRLF3Q8IUI8 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CRLF3Q8IUI8 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CRLF3Q8IUI8 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CRLF3Q8IUI8 PCDHAC2-203ENST00000615316 3011 ntBASIC20.6■□□□□ 0.89
CRLF3Q8IUI8 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
CRLF3Q8IUI8 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CRLF3Q8IUI8 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CRLF3Q8IUI8 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CRLF3Q8IUI8 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CRLF3Q8IUI8 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.6■□□□□ 0.89
CRLF3Q8IUI8 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CRLF3Q8IUI8 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.6■□□□□ 0.89
CRLF3Q8IUI8 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.6■□□□□ 0.89
CRLF3Q8IUI8 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CRLF3Q8IUI8 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.59■□□□□ 0.89
CRLF3Q8IUI8 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CRLF3Q8IUI8 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CRLF3Q8IUI8 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.59■□□□□ 0.89
CRLF3Q8IUI8 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CRLF3Q8IUI8 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CRLF3Q8IUI8 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CRLF3Q8IUI8 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.59■□□□□ 0.89
CRLF3Q8IUI8 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CRLF3Q8IUI8 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CRLF3Q8IUI8 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CRLF3Q8IUI8 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CRLF3Q8IUI8 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.59■□□□□ 0.89
CRLF3Q8IUI8 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CRLF3Q8IUI8 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.59■□□□□ 0.89
CRLF3Q8IUI8 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CRLF3Q8IUI8 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms