Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM50Q86XT4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM50Q86XT4 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM50Q86XT4 AC133561.1-201ENST00000568600 2415 ntBASIC23.17■■□□□ 1.3
TRIM50Q86XT4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC23.17■■□□□ 1.3
TRIM50Q86XT4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM50Q86XT4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM50Q86XT4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC23.16■■□□□ 1.3
TRIM50Q86XT4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM50Q86XT4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC23.16■■□□□ 1.3
TRIM50Q86XT4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC23.16■■□□□ 1.3
TRIM50Q86XT4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC23.16■■□□□ 1.3
TRIM50Q86XT4 AC066615.1-201ENST00000640911 628 ntBASIC23.16■■□□□ 1.3
TRIM50Q86XT4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
TRIM50Q86XT4 GOLGA2P6-201ENST00000340929 2049 ntBASIC23.16■■□□□ 1.3
TRIM50Q86XT4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
TRIM50Q86XT4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM50Q86XT4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC23.15■■□□□ 1.3
TRIM50Q86XT4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
TRIM50Q86XT4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM50Q86XT4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
TRIM50Q86XT4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM50Q86XT4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC23.15■■□□□ 1.3
TRIM50Q86XT4 AC007322.3-201ENST00000426526 701 ntBASIC23.15■■□□□ 1.3
TRIM50Q86XT4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
TRIM50Q86XT4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM50Q86XT4 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TRIM50Q86XT4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
TRIM50Q86XT4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
TRIM50Q86XT4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TRIM50Q86XT4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC23.14■■□□□ 1.29
TRIM50Q86XT4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM50Q86XT4 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
TRIM50Q86XT4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
TRIM50Q86XT4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC23.14■■□□□ 1.29
TRIM50Q86XT4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC23.14■■□□□ 1.29
TRIM50Q86XT4 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC23.14■■□□□ 1.29
TRIM50Q86XT4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC23.14■■□□□ 1.29
TRIM50Q86XT4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC23.14■■□□□ 1.29
TRIM50Q86XT4 ITM2C-210ENST00000620962 501 ntBASIC23.14■■□□□ 1.29
TRIM50Q86XT4 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM50Q86XT4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
TRIM50Q86XT4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC23.14■■□□□ 1.29
TRIM50Q86XT4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM50Q86XT4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM50Q86XT4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM50Q86XT4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC23.13■■□□□ 1.29
TRIM50Q86XT4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC23.13■■□□□ 1.29
TRIM50Q86XT4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC23.13■■□□□ 1.29
TRIM50Q86XT4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC23.13■■□□□ 1.29
TRIM50Q86XT4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC23.13■■□□□ 1.29
TRIM50Q86XT4 PRORSD1P-201ENST00000295112 541 ntBASIC23.13■■□□□ 1.29
TRIM50Q86XT4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC23.13■■□□□ 1.29
TRIM50Q86XT4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM50Q86XT4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC23.13■■□□□ 1.29
TRIM50Q86XT4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC23.13■■□□□ 1.29
TRIM50Q86XT4 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC23.13■■□□□ 1.29
TRIM50Q86XT4 AC100791.3-201ENST00000617619 330 ntBASIC23.13■■□□□ 1.29
TRIM50Q86XT4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC23.13■■□□□ 1.29
TRIM50Q86XT4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM50Q86XT4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM50Q86XT4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM50Q86XT4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM50Q86XT4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
TRIM50Q86XT4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM50Q86XT4 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM50Q86XT4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM50Q86XT4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM50Q86XT4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
TRIM50Q86XT4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM50Q86XT4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM50Q86XT4 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM50Q86XT4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM50Q86XT4 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC23.12■■□□□ 1.29
TRIM50Q86XT4 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM50Q86XT4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM50Q86XT4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM50Q86XT4 MCRIP2P1-201ENST00000394346 511 ntBASIC23.12■■□□□ 1.29
TRIM50Q86XT4 ESRRAP1-201ENST00000400596 1257 ntBASIC23.12■■□□□ 1.29
TRIM50Q86XT4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC23.12■■□□□ 1.29
TRIM50Q86XT4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC23.12■■□□□ 1.29
TRIM50Q86XT4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC23.12■■□□□ 1.29
TRIM50Q86XT4 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC23.12■■□□□ 1.29
TRIM50Q86XT4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
TRIM50Q86XT4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM50Q86XT4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TRIM50Q86XT4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRIM50Q86XT4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRIM50Q86XT4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC23.11■■□□□ 1.29
TRIM50Q86XT4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TRIM50Q86XT4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TRIM50Q86XT4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRIM50Q86XT4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC23.11■■□□□ 1.29
TRIM50Q86XT4 KRT18P29-201ENST00000397031 1267 ntBASIC23.11■■□□□ 1.29
TRIM50Q86XT4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
TRIM50Q86XT4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC23.11■■□□□ 1.29
TRIM50Q86XT4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TRIM50Q86XT4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRIM50Q86XT4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TRIM50Q86XT4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms