Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
COPS6Q7L5N1 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC26.3■■□□□ 1.8
COPS6Q7L5N1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
COPS6Q7L5N1 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
COPS6Q7L5N1 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC26.3■■□□□ 1.8
COPS6Q7L5N1 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
COPS6Q7L5N1 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
COPS6Q7L5N1 GATS-209ENST00000454084 1030 ntTSL 3 BASIC26.3■■□□□ 1.8
COPS6Q7L5N1 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC26.3■■□□□ 1.8
COPS6Q7L5N1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
COPS6Q7L5N1 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
COPS6Q7L5N1 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
COPS6Q7L5N1 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
COPS6Q7L5N1 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
COPS6Q7L5N1 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC26.3■■□□□ 1.8
COPS6Q7L5N1 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
COPS6Q7L5N1 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC26.29■■□□□ 1.8
COPS6Q7L5N1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC26.29■■□□□ 1.8
COPS6Q7L5N1 EP400NL-214ENST00000641289 2402 ntBASIC26.29■■□□□ 1.8
COPS6Q7L5N1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC26.29■■□□□ 1.8
COPS6Q7L5N1 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
COPS6Q7L5N1 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
COPS6Q7L5N1 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC26.29■■□□□ 1.8
COPS6Q7L5N1 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
COPS6Q7L5N1 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
COPS6Q7L5N1 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
COPS6Q7L5N1 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC26.29■■□□□ 1.8
COPS6Q7L5N1 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
COPS6Q7L5N1 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
COPS6Q7L5N1 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC26.29■■□□□ 1.8
COPS6Q7L5N1 NME6-213ENST00000451657 871 ntTSL 2 BASIC26.29■■□□□ 1.8
COPS6Q7L5N1 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC26.29■■□□□ 1.8
COPS6Q7L5N1 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC26.29■■□□□ 1.8
COPS6Q7L5N1 AC008687.6-201ENST00000596318 630 ntBASIC26.29■■□□□ 1.8
COPS6Q7L5N1 ITM2C-210ENST00000620962 501 ntBASIC26.29■■□□□ 1.8
COPS6Q7L5N1 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
COPS6Q7L5N1 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC26.29■■□□□ 1.8
COPS6Q7L5N1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
COPS6Q7L5N1 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
COPS6Q7L5N1 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC26.29■■□□□ 1.8
COPS6Q7L5N1 CYP21A1P-202ENST00000354927 1481 ntBASIC26.29■■□□□ 1.8
COPS6Q7L5N1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC26.29■■□□□ 1.8
COPS6Q7L5N1 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
COPS6Q7L5N1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
COPS6Q7L5N1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COPS6Q7L5N1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COPS6Q7L5N1 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COPS6Q7L5N1 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COPS6Q7L5N1 GAS7-202ENST00000396115 929 ntTSL 5 BASIC26.28■■□□□ 1.8
COPS6Q7L5N1 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC26.28■■□□□ 1.8
COPS6Q7L5N1 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC26.28■■□□□ 1.8
COPS6Q7L5N1 DYM-203ENST00000442713 2147 ntTSL 2 BASIC26.28■■□□□ 1.8
COPS6Q7L5N1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COPS6Q7L5N1 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
COPS6Q7L5N1 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC26.28■■□□□ 1.8
COPS6Q7L5N1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
COPS6Q7L5N1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COPS6Q7L5N1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COPS6Q7L5N1 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
COPS6Q7L5N1 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC26.28■■□□□ 1.8
COPS6Q7L5N1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
COPS6Q7L5N1 ESRRAP1-201ENST00000400596 1257 ntBASIC26.27■■□□□ 1.8
COPS6Q7L5N1 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
COPS6Q7L5N1 AL589743.5-201ENST00000616611 1050 ntBASIC26.27■■□□□ 1.8
COPS6Q7L5N1 AC066615.1-201ENST00000640911 628 ntBASIC26.27■■□□□ 1.8
COPS6Q7L5N1 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
COPS6Q7L5N1 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
COPS6Q7L5N1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
COPS6Q7L5N1 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
COPS6Q7L5N1 PALM-207ENST00000590161 2137 ntTSL 4 BASIC26.27■■□□□ 1.8
COPS6Q7L5N1 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
COPS6Q7L5N1 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC26.27■■□□□ 1.8
COPS6Q7L5N1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC26.26■■□□□ 1.79
COPS6Q7L5N1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC26.26■■□□□ 1.79
COPS6Q7L5N1 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC26.26■■□□□ 1.79
COPS6Q7L5N1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
COPS6Q7L5N1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC26.26■■□□□ 1.79
COPS6Q7L5N1 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
COPS6Q7L5N1 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC26.26■■□□□ 1.79
COPS6Q7L5N1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
COPS6Q7L5N1 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC26.26■■□□□ 1.79
COPS6Q7L5N1 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC26.26■■□□□ 1.79
COPS6Q7L5N1 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC26.26■■□□□ 1.79
COPS6Q7L5N1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC26.26■■□□□ 1.79
COPS6Q7L5N1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC26.25■■□□□ 1.79
COPS6Q7L5N1 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
COPS6Q7L5N1 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
COPS6Q7L5N1 PRORSD1P-201ENST00000295112 541 ntBASIC26.25■■□□□ 1.79
COPS6Q7L5N1 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
COPS6Q7L5N1 KRT18P29-201ENST00000397031 1267 ntBASIC26.25■■□□□ 1.79
COPS6Q7L5N1 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
COPS6Q7L5N1 ADM-205ENST00000528544 586 ntTSL 2 BASIC26.25■■□□□ 1.79
COPS6Q7L5N1 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC26.25■■□□□ 1.79
COPS6Q7L5N1 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC26.25■■□□□ 1.79
COPS6Q7L5N1 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
COPS6Q7L5N1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC26.25■■□□□ 1.79
COPS6Q7L5N1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
COPS6Q7L5N1 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC26.25■■□□□ 1.79
COPS6Q7L5N1 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
COPS6Q7L5N1 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms