Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.42■□□□□ 0.38
VPS13CQ709C8 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
VPS13CQ709C8 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
VPS13CQ709C8 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
VPS13CQ709C8 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VPS13CQ709C8 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
VPS13CQ709C8 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.42■□□□□ 0.38
VPS13CQ709C8 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VPS13CQ709C8 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VPS13CQ709C8 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.42■□□□□ 0.38
VPS13CQ709C8 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VPS13CQ709C8 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.42■□□□□ 0.38
VPS13CQ709C8 AL023875.1-201ENST00000640777 796 ntBASIC17.42■□□□□ 0.38
VPS13CQ709C8 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.42■□□□□ 0.38
VPS13CQ709C8 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VPS13CQ709C8 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.41■□□□□ 0.38
VPS13CQ709C8 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
VPS13CQ709C8 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.41■□□□□ 0.38
VPS13CQ709C8 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.41■□□□□ 0.38
VPS13CQ709C8 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.41■□□□□ 0.38
VPS13CQ709C8 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS13CQ709C8 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VPS13CQ709C8 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VPS13CQ709C8 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.41■□□□□ 0.38
VPS13CQ709C8 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VPS13CQ709C8 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.41■□□□□ 0.38
VPS13CQ709C8 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS13CQ709C8 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
VPS13CQ709C8 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS13CQ709C8 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS13CQ709C8 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS13CQ709C8 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VPS13CQ709C8 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.41■□□□□ 0.38
VPS13CQ709C8 POU5F1P4-201ENST00000413175 1085 ntBASIC17.41■□□□□ 0.38
VPS13CQ709C8 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
VPS13CQ709C8 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VPS13CQ709C8 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS13CQ709C8 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.4■□□□□ 0.38
VPS13CQ709C8 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.4■□□□□ 0.38
VPS13CQ709C8 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
VPS13CQ709C8 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.4■□□□□ 0.38
VPS13CQ709C8 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
VPS13CQ709C8 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS13CQ709C8 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VPS13CQ709C8 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS13CQ709C8 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS13CQ709C8 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VPS13CQ709C8 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS13CQ709C8 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.4■□□□□ 0.38
VPS13CQ709C8 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS13CQ709C8 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS13CQ709C8 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS13CQ709C8 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.4■□□□□ 0.38
VPS13CQ709C8 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.4■□□□□ 0.38
VPS13CQ709C8 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VPS13CQ709C8 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VPS13CQ709C8 CD177P1-201ENST00000606252 935 ntBASIC17.4■□□□□ 0.38
VPS13CQ709C8 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VPS13CQ709C8 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.4■□□□□ 0.38
VPS13CQ709C8 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
VPS13CQ709C8 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.39■□□□□ 0.38
VPS13CQ709C8 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.39■□□□□ 0.38
VPS13CQ709C8 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC17.39■□□□□ 0.38
VPS13CQ709C8 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
VPS13CQ709C8 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
VPS13CQ709C8 AC087499.1-201ENST00000418141 1075 ntBASIC17.39■□□□□ 0.37
VPS13CQ709C8 TMPOP1-202ENST00000424642 1267 ntBASIC17.39■□□□□ 0.37
VPS13CQ709C8 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.39■□□□□ 0.37
VPS13CQ709C8 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
VPS13CQ709C8 AC068473.5-201ENST00000616428 2072 ntBASIC17.39■□□□□ 0.37
VPS13CQ709C8 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VPS13CQ709C8 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VPS13CQ709C8 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VPS13CQ709C8 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.39■□□□□ 0.37
VPS13CQ709C8 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VPS13CQ709C8 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.39■□□□□ 0.37
VPS13CQ709C8 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VPS13CQ709C8 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VPS13CQ709C8 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VPS13CQ709C8 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.38■□□□□ 0.37
VPS13CQ709C8 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VPS13CQ709C8 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.38■□□□□ 0.37
VPS13CQ709C8 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
VPS13CQ709C8 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VPS13CQ709C8 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.38■□□□□ 0.37
VPS13CQ709C8 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.38■□□□□ 0.37
VPS13CQ709C8 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
VPS13CQ709C8 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VPS13CQ709C8 AC139530.1-201ENST00000575312 1977 ntBASIC17.38■□□□□ 0.37
VPS13CQ709C8 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VPS13CQ709C8 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.38■□□□□ 0.37
VPS13CQ709C8 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.38■□□□□ 0.37
VPS13CQ709C8 AC092865.7-201ENST00000641832 219 ntBASIC17.38■□□□□ 0.37
VPS13CQ709C8 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VPS13CQ709C8 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
VPS13CQ709C8 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VPS13CQ709C8 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.38■□□□□ 0.37
VPS13CQ709C8 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
VPS13CQ709C8 AL589743.5-201ENST00000616611 1050 ntBASIC17.38■□□□□ 0.37
VPS13CQ709C8 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms