Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CCDC141Q6ZP82 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC31.24■■■□□ 2.59
CCDC141Q6ZP82 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CCDC141Q6ZP82 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CCDC141Q6ZP82 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC31.24■■■□□ 2.59
CCDC141Q6ZP82 POM121L13P-201ENST00000422362 380 ntBASIC31.24■■■□□ 2.59
CCDC141Q6ZP82 RN7SL471P-201ENST00000580476 299 ntBASIC31.24■■■□□ 2.59
CCDC141Q6ZP82 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC31.24■■■□□ 2.59
CCDC141Q6ZP82 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CCDC141Q6ZP82 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CCDC141Q6ZP82 AC116050.2-201ENST00000612102 1779 ntBASIC31.23■■■□□ 2.59
CCDC141Q6ZP82 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC31.23■■■□□ 2.59
CCDC141Q6ZP82 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CCDC141Q6ZP82 MIR718-201ENST00000390190 70 ntBASIC31.23■■■□□ 2.59
CCDC141Q6ZP82 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CCDC141Q6ZP82 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC31.23■■■□□ 2.59
CCDC141Q6ZP82 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CCDC141Q6ZP82 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CCDC141Q6ZP82 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC31.23■■■□□ 2.59
CCDC141Q6ZP82 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CCDC141Q6ZP82 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CCDC141Q6ZP82 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CCDC141Q6ZP82 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CCDC141Q6ZP82 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC31.22■■■□□ 2.59
CCDC141Q6ZP82 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC31.22■■■□□ 2.59
CCDC141Q6ZP82 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
CCDC141Q6ZP82 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CCDC141Q6ZP82 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC31.22■■■□□ 2.59
CCDC141Q6ZP82 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CCDC141Q6ZP82 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC31.22■■■□□ 2.59
CCDC141Q6ZP82 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CCDC141Q6ZP82 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
CCDC141Q6ZP82 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CCDC141Q6ZP82 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC31.21■■■□□ 2.59
CCDC141Q6ZP82 REXO2-208ENST00000539754 791 ntTSL 2 BASIC31.21■■■□□ 2.59
CCDC141Q6ZP82 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC31.21■■■□□ 2.59
CCDC141Q6ZP82 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CCDC141Q6ZP82 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC31.21■■■□□ 2.59
CCDC141Q6ZP82 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
CCDC141Q6ZP82 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC31.21■■■□□ 2.59
CCDC141Q6ZP82 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
CCDC141Q6ZP82 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CCDC141Q6ZP82 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CCDC141Q6ZP82 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC31.21■■■□□ 2.59
CCDC141Q6ZP82 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC31.21■■■□□ 2.59
CCDC141Q6ZP82 MIR4497-201ENST00000583208 89 ntBASIC31.21■■■□□ 2.59
CCDC141Q6ZP82 NXN-202ENST00000537628 1340 ntTSL 3 BASIC31.2■■■□□ 2.59
CCDC141Q6ZP82 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
CCDC141Q6ZP82 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
CCDC141Q6ZP82 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
CCDC141Q6ZP82 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC31.2■■■□□ 2.58
CCDC141Q6ZP82 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC31.2■■■□□ 2.58
CCDC141Q6ZP82 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC31.2■■■□□ 2.58
CCDC141Q6ZP82 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC31.2■■■□□ 2.58
CCDC141Q6ZP82 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC31.2■■■□□ 2.58
CCDC141Q6ZP82 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
CCDC141Q6ZP82 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC31.19■■■□□ 2.58
CCDC141Q6ZP82 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CCDC141Q6ZP82 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC31.19■■■□□ 2.58
CCDC141Q6ZP82 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
CCDC141Q6ZP82 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC31.19■■■□□ 2.58
CCDC141Q6ZP82 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CCDC141Q6ZP82 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC31.19■■■□□ 2.58
CCDC141Q6ZP82 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC31.19■■■□□ 2.58
CCDC141Q6ZP82 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC31.19■■■□□ 2.58
CCDC141Q6ZP82 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC31.19■■■□□ 2.58
CCDC141Q6ZP82 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
CCDC141Q6ZP82 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CCDC141Q6ZP82 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
CCDC141Q6ZP82 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CCDC141Q6ZP82 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CCDC141Q6ZP82 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
CCDC141Q6ZP82 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CCDC141Q6ZP82 MDFI-202ENST00000373050 809 ntTSL 2 BASIC31.17■■■□□ 2.58
CCDC141Q6ZP82 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CCDC141Q6ZP82 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC31.17■■■□□ 2.58
CCDC141Q6ZP82 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CCDC141Q6ZP82 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CCDC141Q6ZP82 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CCDC141Q6ZP82 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CCDC141Q6ZP82 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC31.16■■■□□ 2.58
CCDC141Q6ZP82 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CCDC141Q6ZP82 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
CCDC141Q6ZP82 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CCDC141Q6ZP82 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CCDC141Q6ZP82 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC31.15■■■□□ 2.58
CCDC141Q6ZP82 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CCDC141Q6ZP82 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
CCDC141Q6ZP82 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CCDC141Q6ZP82 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CCDC141Q6ZP82 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CCDC141Q6ZP82 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CCDC141Q6ZP82 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CCDC141Q6ZP82 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CCDC141Q6ZP82 C9orf163-202ENST00000624034 2573 ntBASIC31.15■■■□□ 2.58
CCDC141Q6ZP82 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC31.15■■■□□ 2.58
CCDC141Q6ZP82 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC31.15■■■□□ 2.58
CCDC141Q6ZP82 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CCDC141Q6ZP82 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CCDC141Q6ZP82 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms