Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM53Q6P2H8 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM53Q6P2H8 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.86■□□□□ 0.61
TMEM53Q6P2H8 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.85■□□□□ 0.61
TMEM53Q6P2H8 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TMEM53Q6P2H8 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.85■□□□□ 0.61
TMEM53Q6P2H8 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM53Q6P2H8 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
TMEM53Q6P2H8 IRS3P-201ENST00000223076 1006 ntBASIC18.85■□□□□ 0.61
TMEM53Q6P2H8 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM53Q6P2H8 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM53Q6P2H8 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.85■□□□□ 0.61
TMEM53Q6P2H8 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM53Q6P2H8 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.85■□□□□ 0.61
TMEM53Q6P2H8 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM53Q6P2H8 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM53Q6P2H8 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.85■□□□□ 0.61
TMEM53Q6P2H8 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM53Q6P2H8 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM53Q6P2H8 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
TMEM53Q6P2H8 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.84■□□□□ 0.61
TMEM53Q6P2H8 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM53Q6P2H8 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.84■□□□□ 0.61
TMEM53Q6P2H8 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM53Q6P2H8 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM53Q6P2H8 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.84■□□□□ 0.61
TMEM53Q6P2H8 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.84■□□□□ 0.61
TMEM53Q6P2H8 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM53Q6P2H8 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.84■□□□□ 0.61
TMEM53Q6P2H8 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM53Q6P2H8 SMUG1P1-201ENST00000590640 811 ntBASIC18.84■□□□□ 0.61
TMEM53Q6P2H8 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.84■□□□□ 0.61
TMEM53Q6P2H8 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM53Q6P2H8 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TMEM53Q6P2H8 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM53Q6P2H8 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.84■□□□□ 0.61
TMEM53Q6P2H8 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM53Q6P2H8 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
TMEM53Q6P2H8 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM53Q6P2H8 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM53Q6P2H8 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM53Q6P2H8 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
TMEM53Q6P2H8 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TMEM53Q6P2H8 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TMEM53Q6P2H8 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
TMEM53Q6P2H8 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.83■□□□□ 0.6
TMEM53Q6P2H8 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TMEM53Q6P2H8 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.83■□□□□ 0.6
TMEM53Q6P2H8 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
TMEM53Q6P2H8 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
TMEM53Q6P2H8 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TMEM53Q6P2H8 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TMEM53Q6P2H8 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.83■□□□□ 0.6
TMEM53Q6P2H8 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
TMEM53Q6P2H8 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TMEM53Q6P2H8 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TMEM53Q6P2H8 LINC01006-201ENST00000333319 2292 ntBASIC18.83■□□□□ 0.6
TMEM53Q6P2H8 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
TMEM53Q6P2H8 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM53Q6P2H8 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
TMEM53Q6P2H8 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM53Q6P2H8 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM53Q6P2H8 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TMEM53Q6P2H8 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM53Q6P2H8 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.82■□□□□ 0.6
TMEM53Q6P2H8 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM53Q6P2H8 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM53Q6P2H8 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM53Q6P2H8 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM53Q6P2H8 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.82■□□□□ 0.6
TMEM53Q6P2H8 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.82■□□□□ 0.6
TMEM53Q6P2H8 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM53Q6P2H8 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.82■□□□□ 0.6
TMEM53Q6P2H8 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM53Q6P2H8 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM53Q6P2H8 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM53Q6P2H8 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM53Q6P2H8 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM53Q6P2H8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.82■□□□□ 0.6
TMEM53Q6P2H8 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM53Q6P2H8 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM53Q6P2H8 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.81■□□□□ 0.6
TMEM53Q6P2H8 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM53Q6P2H8 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.81■□□□□ 0.6
TMEM53Q6P2H8 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM53Q6P2H8 AL354811.1-201ENST00000610286 706 ntBASIC18.81■□□□□ 0.6
TMEM53Q6P2H8 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.81■□□□□ 0.6
TMEM53Q6P2H8 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.81■□□□□ 0.6
TMEM53Q6P2H8 AL358852.1-201ENST00000623174 1268 ntBASIC18.81■□□□□ 0.6
TMEM53Q6P2H8 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.81■□□□□ 0.6
TMEM53Q6P2H8 AP004607.7-201ENST00000527152 1677 ntBASIC18.81■□□□□ 0.6
TMEM53Q6P2H8 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM53Q6P2H8 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM53Q6P2H8 FAM99A-202ENST00000538190 1989 ntBASIC18.81■□□□□ 0.6
TMEM53Q6P2H8 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM53Q6P2H8 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TMEM53Q6P2H8 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM53Q6P2H8 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM53Q6P2H8 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.8■□□□□ 0.6
TMEM53Q6P2H8 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms