Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 AC092118.2-201ENST00000613495 667 ntBASIC18.71■□□□□ 0.59
RTL6Q6ICC9 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.71■□□□□ 0.59
RTL6Q6ICC9 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.71■□□□□ 0.59
RTL6Q6ICC9 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.71■□□□□ 0.59
RTL6Q6ICC9 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RTL6Q6ICC9 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RTL6Q6ICC9 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
RTL6Q6ICC9 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTL6Q6ICC9 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RTL6Q6ICC9 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTL6Q6ICC9 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTL6Q6ICC9 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.7■□□□□ 0.58
RTL6Q6ICC9 BX276092.2-201ENST00000417668 665 ntBASIC18.7■□□□□ 0.58
RTL6Q6ICC9 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTL6Q6ICC9 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.7■□□□□ 0.58
RTL6Q6ICC9 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.7■□□□□ 0.58
RTL6Q6ICC9 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.7■□□□□ 0.58
RTL6Q6ICC9 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTL6Q6ICC9 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.7■□□□□ 0.58
RTL6Q6ICC9 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTL6Q6ICC9 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTL6Q6ICC9 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTL6Q6ICC9 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.69■□□□□ 0.58
RTL6Q6ICC9 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RTL6Q6ICC9 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RTL6Q6ICC9 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.69■□□□□ 0.58
RTL6Q6ICC9 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
RTL6Q6ICC9 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTL6Q6ICC9 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RTL6Q6ICC9 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTL6Q6ICC9 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RTL6Q6ICC9 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.69■□□□□ 0.58
RTL6Q6ICC9 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTL6Q6ICC9 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RTL6Q6ICC9 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.69■□□□□ 0.58
RTL6Q6ICC9 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RTL6Q6ICC9 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTL6Q6ICC9 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RTL6Q6ICC9 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTL6Q6ICC9 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTL6Q6ICC9 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RTL6Q6ICC9 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
RTL6Q6ICC9 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RTL6Q6ICC9 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RTL6Q6ICC9 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.68■□□□□ 0.58
RTL6Q6ICC9 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.68■□□□□ 0.58
RTL6Q6ICC9 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.68■□□□□ 0.58
RTL6Q6ICC9 RARRES2P4-201ENST00000514074 484 ntBASIC18.68■□□□□ 0.58
RTL6Q6ICC9 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RTL6Q6ICC9 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RTL6Q6ICC9 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
RTL6Q6ICC9 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RTL6Q6ICC9 AC010542.4-201ENST00000563151 1910 ntBASIC18.68■□□□□ 0.58
RTL6Q6ICC9 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RTL6Q6ICC9 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
RTL6Q6ICC9 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RTL6Q6ICC9 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.68■□□□□ 0.58
RTL6Q6ICC9 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTL6Q6ICC9 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTL6Q6ICC9 AC010980.2-201ENST00000587099 1412 ntBASIC18.67■□□□□ 0.58
RTL6Q6ICC9 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
RTL6Q6ICC9 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTL6Q6ICC9 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTL6Q6ICC9 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
RTL6Q6ICC9 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.67■□□□□ 0.58
RTL6Q6ICC9 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTL6Q6ICC9 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.67■□□□□ 0.58
RTL6Q6ICC9 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RTL6Q6ICC9 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.67■□□□□ 0.58
RTL6Q6ICC9 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RTL6Q6ICC9 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.67■□□□□ 0.58
RTL6Q6ICC9 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.67■□□□□ 0.58
RTL6Q6ICC9 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
RTL6Q6ICC9 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.67■□□□□ 0.58
RTL6Q6ICC9 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RTL6Q6ICC9 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RTL6Q6ICC9 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTL6Q6ICC9 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RTL6Q6ICC9 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTL6Q6ICC9 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
RTL6Q6ICC9 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTL6Q6ICC9 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.67■□□□□ 0.58
RTL6Q6ICC9 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTL6Q6ICC9 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RTL6Q6ICC9 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RTL6Q6ICC9 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RTL6Q6ICC9 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RTL6Q6ICC9 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RTL6Q6ICC9 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.66■□□□□ 0.58
RTL6Q6ICC9 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
RTL6Q6ICC9 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RTL6Q6ICC9 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RTL6Q6ICC9 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.66■□□□□ 0.58
RTL6Q6ICC9 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.66■□□□□ 0.58
RTL6Q6ICC9 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.66■□□□□ 0.58
RTL6Q6ICC9 RNA5SP413-201ENST00000516373 109 ntBASIC18.66■□□□□ 0.58
RTL6Q6ICC9 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.66■□□□□ 0.58
RTL6Q6ICC9 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RTL6Q6ICC9 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.66■□□□□ 0.58
RTL6Q6ICC9 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms