Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LGSNQ5TDP6 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.86■□□□□ 0.93
LGSNQ5TDP6 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
LGSNQ5TDP6 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LGSNQ5TDP6 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.86■□□□□ 0.93
LGSNQ5TDP6 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LGSNQ5TDP6 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LGSNQ5TDP6 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
LGSNQ5TDP6 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
LGSNQ5TDP6 AC020907.5-201ENST00000624372 1936 ntBASIC20.86■□□□□ 0.93
LGSNQ5TDP6 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LGSNQ5TDP6 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.86■□□□□ 0.93
LGSNQ5TDP6 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LGSNQ5TDP6 AIRN-201ENST00000601203 4374 ntBASIC20.85■□□□□ 0.93
LGSNQ5TDP6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
LGSNQ5TDP6 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LGSNQ5TDP6 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.85■□□□□ 0.93
LGSNQ5TDP6 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LGSNQ5TDP6 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LGSNQ5TDP6 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LGSNQ5TDP6 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.85■□□□□ 0.93
LGSNQ5TDP6 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LGSNQ5TDP6 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.85■□□□□ 0.93
LGSNQ5TDP6 AC126544.1-201ENST00000580842 1059 ntBASIC20.85■□□□□ 0.93
LGSNQ5TDP6 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.85■□□□□ 0.93
LGSNQ5TDP6 AC233992.3-201ENST00000607491 485 ntBASIC20.85■□□□□ 0.93
LGSNQ5TDP6 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.85■□□□□ 0.93
LGSNQ5TDP6 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.85■□□□□ 0.93
LGSNQ5TDP6 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.85■□□□□ 0.93
LGSNQ5TDP6 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LGSNQ5TDP6 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.85■□□□□ 0.93
LGSNQ5TDP6 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
LGSNQ5TDP6 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.85■□□□□ 0.93
LGSNQ5TDP6 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.85■□□□□ 0.93
LGSNQ5TDP6 AC027702.1-201ENST00000563810 1770 ntBASIC20.85■□□□□ 0.93
LGSNQ5TDP6 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LGSNQ5TDP6 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LGSNQ5TDP6 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LGSNQ5TDP6 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LGSNQ5TDP6 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LGSNQ5TDP6 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.84■□□□□ 0.93
LGSNQ5TDP6 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LGSNQ5TDP6 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.84■□□□□ 0.93
LGSNQ5TDP6 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LGSNQ5TDP6 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.84■□□□□ 0.93
LGSNQ5TDP6 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.84■□□□□ 0.93
LGSNQ5TDP6 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
LGSNQ5TDP6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.84■□□□□ 0.93
LGSNQ5TDP6 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LGSNQ5TDP6 AC055733.4-201ENST00000638462 1354 ntBASIC20.84■□□□□ 0.93
LGSNQ5TDP6 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LGSNQ5TDP6 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
LGSNQ5TDP6 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LGSNQ5TDP6 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.93
LGSNQ5TDP6 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
LGSNQ5TDP6 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LGSNQ5TDP6 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LGSNQ5TDP6 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LGSNQ5TDP6 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
LGSNQ5TDP6 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
LGSNQ5TDP6 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LGSNQ5TDP6 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LGSNQ5TDP6 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LGSNQ5TDP6 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LGSNQ5TDP6 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LGSNQ5TDP6 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
LGSNQ5TDP6 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
LGSNQ5TDP6 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LGSNQ5TDP6 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LGSNQ5TDP6 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LGSNQ5TDP6 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LGSNQ5TDP6 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
LGSNQ5TDP6 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LGSNQ5TDP6 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.82■□□□□ 0.92
LGSNQ5TDP6 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LGSNQ5TDP6 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
LGSNQ5TDP6 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.82■□□□□ 0.92
LGSNQ5TDP6 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LGSNQ5TDP6 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LGSNQ5TDP6 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LGSNQ5TDP6 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
LGSNQ5TDP6 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LGSNQ5TDP6 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LGSNQ5TDP6 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.82■□□□□ 0.92
LGSNQ5TDP6 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.82■□□□□ 0.92
LGSNQ5TDP6 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LGSNQ5TDP6 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.82■□□□□ 0.92
LGSNQ5TDP6 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.82■□□□□ 0.92
LGSNQ5TDP6 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.81■□□□□ 0.92
LGSNQ5TDP6 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
LGSNQ5TDP6 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LGSNQ5TDP6 AC131281.2-201ENST00000520478 145 ntBASIC20.81■□□□□ 0.92
LGSNQ5TDP6 IGHV3-19-201ENST00000521488 291 ntBASIC20.81■□□□□ 0.92
LGSNQ5TDP6 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LGSNQ5TDP6 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LGSNQ5TDP6 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.81■□□□□ 0.92
LGSNQ5TDP6 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LGSNQ5TDP6 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
LGSNQ5TDP6 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
LGSNQ5TDP6 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms