Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC23.74■■□□□ 1.39
COL13A1Q5TAT6 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC23.74■■□□□ 1.39
COL13A1Q5TAT6 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL13A1Q5TAT6 GPX4-207ENST00000589115 812 ntTSL 2 BASIC23.74■■□□□ 1.39
COL13A1Q5TAT6 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
COL13A1Q5TAT6 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC23.74■■□□□ 1.39
COL13A1Q5TAT6 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL13A1Q5TAT6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
COL13A1Q5TAT6 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
COL13A1Q5TAT6 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
COL13A1Q5TAT6 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.74■■□□□ 1.39
COL13A1Q5TAT6 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL13A1Q5TAT6 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.73■■□□□ 1.39
COL13A1Q5TAT6 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.73■■□□□ 1.39
COL13A1Q5TAT6 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
COL13A1Q5TAT6 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.73■■□□□ 1.39
COL13A1Q5TAT6 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
COL13A1Q5TAT6 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
COL13A1Q5TAT6 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
COL13A1Q5TAT6 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL13A1Q5TAT6 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC23.73■■□□□ 1.39
COL13A1Q5TAT6 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC23.73■■□□□ 1.39
COL13A1Q5TAT6 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL13A1Q5TAT6 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL13A1Q5TAT6 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL13A1Q5TAT6 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL13A1Q5TAT6 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
COL13A1Q5TAT6 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL13A1Q5TAT6 ECEL1P2-202ENST00000465689 757 ntBASIC23.72■■□□□ 1.39
COL13A1Q5TAT6 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC23.72■■□□□ 1.39
COL13A1Q5TAT6 FDX2-207ENST00000494368 584 ntTSL 4 BASIC23.72■■□□□ 1.39
COL13A1Q5TAT6 AL121956.5-201ENST00000625261 221 ntBASIC23.72■■□□□ 1.39
COL13A1Q5TAT6 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC23.72■■□□□ 1.39
COL13A1Q5TAT6 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL13A1Q5TAT6 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
COL13A1Q5TAT6 AC142086.6-201ENST00000621154 1765 ntBASIC23.71■■□□□ 1.39
COL13A1Q5TAT6 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL13A1Q5TAT6 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC23.71■■□□□ 1.39
COL13A1Q5TAT6 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL13A1Q5TAT6 TSPY21P-201ENST00000433481 731 ntBASIC23.71■■□□□ 1.39
COL13A1Q5TAT6 TSPY23P-201ENST00000440136 739 ntBASIC23.71■■□□□ 1.39
COL13A1Q5TAT6 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
COL13A1Q5TAT6 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC23.71■■□□□ 1.39
COL13A1Q5TAT6 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC23.71■■□□□ 1.39
COL13A1Q5TAT6 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC23.71■■□□□ 1.39
COL13A1Q5TAT6 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.39
COL13A1Q5TAT6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC23.7■■□□□ 1.38
COL13A1Q5TAT6 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
COL13A1Q5TAT6 KRT8P45-201ENST00000414328 1447 ntBASIC23.7■■□□□ 1.38
COL13A1Q5TAT6 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
COL13A1Q5TAT6 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
COL13A1Q5TAT6 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
COL13A1Q5TAT6 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC23.7■■□□□ 1.38
COL13A1Q5TAT6 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC23.7■■□□□ 1.38
COL13A1Q5TAT6 AL845331.1-201ENST00000424978 1190 ntBASIC23.7■■□□□ 1.38
COL13A1Q5TAT6 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC23.7■■□□□ 1.38
COL13A1Q5TAT6 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC23.7■■□□□ 1.38
COL13A1Q5TAT6 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC23.7■■□□□ 1.38
COL13A1Q5TAT6 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC23.7■■□□□ 1.38
COL13A1Q5TAT6 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
COL13A1Q5TAT6 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
COL13A1Q5TAT6 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
COL13A1Q5TAT6 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
COL13A1Q5TAT6 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL13A1Q5TAT6 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL13A1Q5TAT6 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL13A1Q5TAT6 AC022898.2-201ENST00000616822 1312 ntBASIC23.69■■□□□ 1.38
COL13A1Q5TAT6 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
COL13A1Q5TAT6 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL13A1Q5TAT6 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
COL13A1Q5TAT6 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL13A1Q5TAT6 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL13A1Q5TAT6 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL13A1Q5TAT6 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC23.69■■□□□ 1.38
COL13A1Q5TAT6 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
COL13A1Q5TAT6 KRT17P6-201ENST00000453795 1220 ntBASIC23.69■■□□□ 1.38
COL13A1Q5TAT6 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC23.69■■□□□ 1.38
COL13A1Q5TAT6 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC23.69■■□□□ 1.38
COL13A1Q5TAT6 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC23.69■■□□□ 1.38
COL13A1Q5TAT6 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
COL13A1Q5TAT6 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL13A1Q5TAT6 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC23.69■■□□□ 1.38
COL13A1Q5TAT6 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL13A1Q5TAT6 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC23.68■■□□□ 1.38
COL13A1Q5TAT6 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL13A1Q5TAT6 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL13A1Q5TAT6 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
COL13A1Q5TAT6 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC23.68■■□□□ 1.38
COL13A1Q5TAT6 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL13A1Q5TAT6 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL13A1Q5TAT6 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL13A1Q5TAT6 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC23.68■■□□□ 1.38
COL13A1Q5TAT6 RNF152P1-201ENST00000397754 604 ntBASIC23.68■■□□□ 1.38
COL13A1Q5TAT6 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
COL13A1Q5TAT6 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC23.68■■□□□ 1.38
COL13A1Q5TAT6 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC23.68■■□□□ 1.38
COL13A1Q5TAT6 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL13A1Q5TAT6 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC23.68■■□□□ 1.38
COL13A1Q5TAT6 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
COL13A1Q5TAT6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms