Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00242Q5T6M2 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00242Q5T6M2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC00242Q5T6M2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00242Q5T6M2 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00242Q5T6M2 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00242Q5T6M2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC14.16□□□□□ -0.14
LINC00242Q5T6M2 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC14.16□□□□□ -0.14
LINC00242Q5T6M2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC14.16□□□□□ -0.14
LINC00242Q5T6M2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC14.16□□□□□ -0.14
LINC00242Q5T6M2 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC00242Q5T6M2 AL512631.2-201ENST00000604634 923 ntBASIC14.16□□□□□ -0.14
LINC00242Q5T6M2 AC011298.3-201ENST00000615796 283 ntBASIC14.16□□□□□ -0.14
LINC00242Q5T6M2 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
LINC00242Q5T6M2 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC14.16□□□□□ -0.14
LINC00242Q5T6M2 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC14.16□□□□□ -0.14
LINC00242Q5T6M2 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC14.16□□□□□ -0.14
LINC00242Q5T6M2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00242Q5T6M2 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00242Q5T6M2 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00242Q5T6M2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00242Q5T6M2 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00242Q5T6M2 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC00242Q5T6M2 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00242Q5T6M2 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00242Q5T6M2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00242Q5T6M2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00242Q5T6M2 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00242Q5T6M2 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00242Q5T6M2 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00242Q5T6M2 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00242Q5T6M2 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00242Q5T6M2 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00242Q5T6M2 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00242Q5T6M2 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC00242Q5T6M2 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00242Q5T6M2 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC14.15□□□□□ -0.14
LINC00242Q5T6M2 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00242Q5T6M2 ASL-203ENST00000380839 1765 ntTSL 5 BASIC14.15□□□□□ -0.14
LINC00242Q5T6M2 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LINC00242Q5T6M2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00242Q5T6M2 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00242Q5T6M2 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC00242Q5T6M2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC14.15□□□□□ -0.14
LINC00242Q5T6M2 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC14.15□□□□□ -0.14
LINC00242Q5T6M2 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LINC00242Q5T6M2 RNF165-205ENST00000588679 2904 ntBASIC14.15□□□□□ -0.14
LINC00242Q5T6M2 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00242Q5T6M2 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00242Q5T6M2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00242Q5T6M2 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC00242Q5T6M2 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00242Q5T6M2 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
LINC00242Q5T6M2 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LINC00242Q5T6M2 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00242Q5T6M2 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC14.15□□□□□ -0.14
LINC00242Q5T6M2 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00242Q5T6M2 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00242Q5T6M2 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC00242Q5T6M2 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00242Q5T6M2 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00242Q5T6M2 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC14.14□□□□□ -0.15
LINC00242Q5T6M2 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00242Q5T6M2 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00242Q5T6M2 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00242Q5T6M2 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00242Q5T6M2 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00242Q5T6M2 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00242Q5T6M2 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00242Q5T6M2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00242Q5T6M2 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC14.14□□□□□ -0.15
LINC00242Q5T6M2 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
LINC00242Q5T6M2 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00242Q5T6M2 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00242Q5T6M2 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC14.14□□□□□ -0.15
LINC00242Q5T6M2 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00242Q5T6M2 PXK-203ENST00000383715 1756 ntTSL 5 BASIC14.14□□□□□ -0.15
LINC00242Q5T6M2 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00242Q5T6M2 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC00242Q5T6M2 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00242Q5T6M2 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC14.13□□□□□ -0.15
LINC00242Q5T6M2 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00242Q5T6M2 AC099778.1-201ENST00000568593 1911 ntBASIC14.13□□□□□ -0.15
LINC00242Q5T6M2 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC14.13□□□□□ -0.15
LINC00242Q5T6M2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC14.13□□□□□ -0.15
LINC00242Q5T6M2 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00242Q5T6M2 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
LINC00242Q5T6M2 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC14.13□□□□□ -0.15
LINC00242Q5T6M2 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00242Q5T6M2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC14.13□□□□□ -0.15
LINC00242Q5T6M2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC14.13□□□□□ -0.15
LINC00242Q5T6M2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC14.13□□□□□ -0.15
LINC00242Q5T6M2 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
LINC00242Q5T6M2 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
LINC00242Q5T6M2 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00242Q5T6M2 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC14.13□□□□□ -0.15
LINC00242Q5T6M2 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC14.13□□□□□ -0.15
LINC00242Q5T6M2 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00242Q5T6M2 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00242Q5T6M2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms