Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC11.53□□□□□ -0.56
UBR4Q5T4S7 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
UBR4Q5T4S7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
UBR4Q5T4S7 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UBR4Q5T4S7 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC11.53□□□□□ -0.56
UBR4Q5T4S7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC11.53□□□□□ -0.56
UBR4Q5T4S7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC11.53□□□□□ -0.56
UBR4Q5T4S7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
UBR4Q5T4S7 HTR7P1-201ENST00000538670 1336 ntBASIC11.53□□□□□ -0.56
UBR4Q5T4S7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
UBR4Q5T4S7 AL139424.1-201ENST00000607572 797 ntBASIC11.53□□□□□ -0.56
UBR4Q5T4S7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UBR4Q5T4S7 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UBR4Q5T4S7 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
UBR4Q5T4S7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
UBR4Q5T4S7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
UBR4Q5T4S7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
UBR4Q5T4S7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.56
UBR4Q5T4S7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
UBR4Q5T4S7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
UBR4Q5T4S7 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
UBR4Q5T4S7 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
UBR4Q5T4S7 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.56
UBR4Q5T4S7 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC11.52□□□□□ -0.56
UBR4Q5T4S7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.56
UBR4Q5T4S7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBR4Q5T4S7 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
UBR4Q5T4S7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
UBR4Q5T4S7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
UBR4Q5T4S7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBR4Q5T4S7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC11.52□□□□□ -0.57
UBR4Q5T4S7 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBR4Q5T4S7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC11.52□□□□□ -0.57
UBR4Q5T4S7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC11.52□□□□□ -0.57
UBR4Q5T4S7 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC11.52□□□□□ -0.57
UBR4Q5T4S7 AC005332.1-201ENST00000577698 1310 ntBASIC11.52□□□□□ -0.57
UBR4Q5T4S7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
UBR4Q5T4S7 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBR4Q5T4S7 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBR4Q5T4S7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC11.52□□□□□ -0.57
UBR4Q5T4S7 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBR4Q5T4S7 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBR4Q5T4S7 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBR4Q5T4S7 NUDT16P1-203ENST00000513809 620 ntBASIC11.52□□□□□ -0.57
UBR4Q5T4S7 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBR4Q5T4S7 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC11.52□□□□□ -0.57
UBR4Q5T4S7 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC11.52□□□□□ -0.57
UBR4Q5T4S7 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
UBR4Q5T4S7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
UBR4Q5T4S7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBR4Q5T4S7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBR4Q5T4S7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBR4Q5T4S7 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
UBR4Q5T4S7 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC11.51□□□□□ -0.57
UBR4Q5T4S7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBR4Q5T4S7 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
UBR4Q5T4S7 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC11.51□□□□□ -0.57
UBR4Q5T4S7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC11.51□□□□□ -0.57
UBR4Q5T4S7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC11.51□□□□□ -0.57
UBR4Q5T4S7 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC11.51□□□□□ -0.57
UBR4Q5T4S7 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC11.51□□□□□ -0.57
UBR4Q5T4S7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC11.51□□□□□ -0.57
UBR4Q5T4S7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC11.51□□□□□ -0.57
UBR4Q5T4S7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
UBR4Q5T4S7 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBR4Q5T4S7 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC11.51□□□□□ -0.57
UBR4Q5T4S7 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC11.51□□□□□ -0.57
UBR4Q5T4S7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC11.51□□□□□ -0.57
UBR4Q5T4S7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBR4Q5T4S7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC11.51□□□□□ -0.57
UBR4Q5T4S7 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
UBR4Q5T4S7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
UBR4Q5T4S7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
UBR4Q5T4S7 PTK2-216ENST00000519881 863 ntTSL 3 BASIC11.5□□□□□ -0.57
UBR4Q5T4S7 SLC25A1P4-201ENST00000567977 778 ntBASIC11.5□□□□□ -0.57
UBR4Q5T4S7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC11.5□□□□□ -0.57
UBR4Q5T4S7 AC068587.7-201ENST00000641602 218 ntBASIC11.5□□□□□ -0.57
UBR4Q5T4S7 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
UBR4Q5T4S7 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
UBR4Q5T4S7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC11.5□□□□□ -0.57
UBR4Q5T4S7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC11.5□□□□□ -0.57
UBR4Q5T4S7 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC11.5□□□□□ -0.57
UBR4Q5T4S7 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC11.5□□□□□ -0.57
UBR4Q5T4S7 FAM207BP-201ENST00000447172 505 ntBASIC11.5□□□□□ -0.57
UBR4Q5T4S7 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC11.5□□□□□ -0.57
UBR4Q5T4S7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
UBR4Q5T4S7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
UBR4Q5T4S7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
UBR4Q5T4S7 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC11.5□□□□□ -0.57
UBR4Q5T4S7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
UBR4Q5T4S7 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC11.5□□□□□ -0.57
UBR4Q5T4S7 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
UBR4Q5T4S7 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC11.5□□□□□ -0.57
UBR4Q5T4S7 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
UBR4Q5T4S7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBR4Q5T4S7 IER3-202ENST00000376377 1350 ntBASIC11.49□□□□□ -0.57
UBR4Q5T4S7 AC110285.5-201ENST00000611501 352 ntBASIC11.49□□□□□ -0.57
UBR4Q5T4S7 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBR4Q5T4S7 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBR4Q5T4S7 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms