Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.55■□□□□ 0.72
LRIF1Q5T3J3 AP004607.4-201ENST00000530158 1459 ntBASIC19.55■□□□□ 0.72
LRIF1Q5T3J3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRIF1Q5T3J3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
LRIF1Q5T3J3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRIF1Q5T3J3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRIF1Q5T3J3 AP001330.3-201ENST00000520123 633 ntBASIC19.55■□□□□ 0.72
LRIF1Q5T3J3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.55■□□□□ 0.72
LRIF1Q5T3J3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
LRIF1Q5T3J3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.55■□□□□ 0.72
LRIF1Q5T3J3 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.55■□□□□ 0.72
LRIF1Q5T3J3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRIF1Q5T3J3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRIF1Q5T3J3 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRIF1Q5T3J3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRIF1Q5T3J3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.55■□□□□ 0.72
LRIF1Q5T3J3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRIF1Q5T3J3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRIF1Q5T3J3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRIF1Q5T3J3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.55■□□□□ 0.72
LRIF1Q5T3J3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.54■□□□□ 0.72
LRIF1Q5T3J3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.54■□□□□ 0.72
LRIF1Q5T3J3 AC061975.6-201ENST00000579045 1553 ntBASIC19.54■□□□□ 0.72
LRIF1Q5T3J3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.54■□□□□ 0.72
LRIF1Q5T3J3 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRIF1Q5T3J3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.54■□□□□ 0.72
LRIF1Q5T3J3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
LRIF1Q5T3J3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.54■□□□□ 0.72
LRIF1Q5T3J3 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.54■□□□□ 0.72
LRIF1Q5T3J3 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.54■□□□□ 0.72
LRIF1Q5T3J3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
LRIF1Q5T3J3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRIF1Q5T3J3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRIF1Q5T3J3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRIF1Q5T3J3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.54■□□□□ 0.72
LRIF1Q5T3J3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
LRIF1Q5T3J3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRIF1Q5T3J3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRIF1Q5T3J3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
LRIF1Q5T3J3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRIF1Q5T3J3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRIF1Q5T3J3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.54■□□□□ 0.72
LRIF1Q5T3J3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
LRIF1Q5T3J3 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRIF1Q5T3J3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.53■□□□□ 0.72
LRIF1Q5T3J3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.53■□□□□ 0.72
LRIF1Q5T3J3 AL512408.1-201ENST00000569378 2000 ntBASIC19.53■□□□□ 0.72
LRIF1Q5T3J3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
LRIF1Q5T3J3 EDA-201ENST00000338901 1233 ntBASIC19.53■□□□□ 0.72
LRIF1Q5T3J3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRIF1Q5T3J3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.53■□□□□ 0.72
LRIF1Q5T3J3 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.53■□□□□ 0.72
LRIF1Q5T3J3 AC012414.1-201ENST00000556676 535 ntBASIC19.53■□□□□ 0.72
LRIF1Q5T3J3 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.53■□□□□ 0.72
LRIF1Q5T3J3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.53■□□□□ 0.72
LRIF1Q5T3J3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.53■□□□□ 0.72
LRIF1Q5T3J3 AC106739.1-201ENST00000617035 715 ntBASIC19.53■□□□□ 0.72
LRIF1Q5T3J3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
LRIF1Q5T3J3 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRIF1Q5T3J3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
LRIF1Q5T3J3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRIF1Q5T3J3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRIF1Q5T3J3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.52■□□□□ 0.72
LRIF1Q5T3J3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
LRIF1Q5T3J3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
LRIF1Q5T3J3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRIF1Q5T3J3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
LRIF1Q5T3J3 PBX2P1-201ENST00000493219 1291 ntBASIC19.52■□□□□ 0.72
LRIF1Q5T3J3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.52■□□□□ 0.72
LRIF1Q5T3J3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.52■□□□□ 0.72
LRIF1Q5T3J3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.52■□□□□ 0.72
LRIF1Q5T3J3 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRIF1Q5T3J3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRIF1Q5T3J3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRIF1Q5T3J3 RASA4CP-201ENST00000424092 1398 ntBASIC19.52■□□□□ 0.72
LRIF1Q5T3J3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.52■□□□□ 0.72
LRIF1Q5T3J3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRIF1Q5T3J3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
LRIF1Q5T3J3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRIF1Q5T3J3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
LRIF1Q5T3J3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LRIF1Q5T3J3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.51■□□□□ 0.71
LRIF1Q5T3J3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LRIF1Q5T3J3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.51■□□□□ 0.71
LRIF1Q5T3J3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.51■□□□□ 0.71
LRIF1Q5T3J3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRIF1Q5T3J3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRIF1Q5T3J3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRIF1Q5T3J3 AC096631.2-201ENST00000436136 790 ntBASIC19.51■□□□□ 0.71
LRIF1Q5T3J3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.51■□□□□ 0.71
LRIF1Q5T3J3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRIF1Q5T3J3 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.51■□□□□ 0.71
LRIF1Q5T3J3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRIF1Q5T3J3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRIF1Q5T3J3 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
LRIF1Q5T3J3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
LRIF1Q5T3J3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRIF1Q5T3J3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LRIF1Q5T3J3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRIF1Q5T3J3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms