Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CBWD3Q5JTY5 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
CBWD3Q5JTY5 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
CBWD3Q5JTY5 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CBWD3Q5JTY5 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC22.43■■□□□ 1.18
CBWD3Q5JTY5 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
CBWD3Q5JTY5 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CBWD3Q5JTY5 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC22.43■■□□□ 1.18
CBWD3Q5JTY5 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CBWD3Q5JTY5 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22.43■■□□□ 1.18
CBWD3Q5JTY5 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
CBWD3Q5JTY5 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC22.43■■□□□ 1.18
CBWD3Q5JTY5 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.43■■□□□ 1.18
CBWD3Q5JTY5 DBI-210ENST00000542275 757 ntTSL 5 BASIC22.43■■□□□ 1.18
CBWD3Q5JTY5 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.43■■□□□ 1.18
CBWD3Q5JTY5 SLC7A5P1-201ENST00000568957 537 ntBASIC22.43■■□□□ 1.18
CBWD3Q5JTY5 ANKRD20A6P-201ENST00000618763 204 ntBASIC22.43■■□□□ 1.18
CBWD3Q5JTY5 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CBWD3Q5JTY5 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
CBWD3Q5JTY5 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CBWD3Q5JTY5 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CBWD3Q5JTY5 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC22.43■■□□□ 1.18
CBWD3Q5JTY5 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CBWD3Q5JTY5 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CBWD3Q5JTY5 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CBWD3Q5JTY5 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
CBWD3Q5JTY5 RBM17P2-201ENST00000616397 1405 ntBASIC22.42■■□□□ 1.18
CBWD3Q5JTY5 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CBWD3Q5JTY5 AC011484.1-201ENST00000377652 1995 ntBASIC22.42■■□□□ 1.18
CBWD3Q5JTY5 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
CBWD3Q5JTY5 AL162430.1-201ENST00000480705 870 ntBASIC22.42■■□□□ 1.18
CBWD3Q5JTY5 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC22.42■■□□□ 1.18
CBWD3Q5JTY5 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CBWD3Q5JTY5 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CBWD3Q5JTY5 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CBWD3Q5JTY5 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CBWD3Q5JTY5 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
CBWD3Q5JTY5 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CBWD3Q5JTY5 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CBWD3Q5JTY5 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CBWD3Q5JTY5 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC22.41■■□□□ 1.18
CBWD3Q5JTY5 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CBWD3Q5JTY5 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
CBWD3Q5JTY5 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CBWD3Q5JTY5 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC22.41■■□□□ 1.18
CBWD3Q5JTY5 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
CBWD3Q5JTY5 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC22.41■■□□□ 1.18
CBWD3Q5JTY5 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC22.41■■□□□ 1.18
CBWD3Q5JTY5 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC22.41■■□□□ 1.18
CBWD3Q5JTY5 MYCNOS-205ENST00000641950 531 ntBASIC22.41■■□□□ 1.18
CBWD3Q5JTY5 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CBWD3Q5JTY5 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
CBWD3Q5JTY5 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
CBWD3Q5JTY5 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CBWD3Q5JTY5 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CBWD3Q5JTY5 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
CBWD3Q5JTY5 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CBWD3Q5JTY5 ME2-216ENST00000639850 2331 ntTSL 5 BASIC22.4■■□□□ 1.18
CBWD3Q5JTY5 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC22.4■■□□□ 1.18
CBWD3Q5JTY5 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
CBWD3Q5JTY5 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC22.4■■□□□ 1.18
CBWD3Q5JTY5 PARP1-202ENST00000366792 553 ntTSL 3 BASIC22.4■■□□□ 1.18
CBWD3Q5JTY5 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
CBWD3Q5JTY5 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.4■■□□□ 1.18
CBWD3Q5JTY5 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC22.4■■□□□ 1.18
CBWD3Q5JTY5 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CBWD3Q5JTY5 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CBWD3Q5JTY5 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CBWD3Q5JTY5 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CBWD3Q5JTY5 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
CBWD3Q5JTY5 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC22.4■■□□□ 1.18
CBWD3Q5JTY5 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CBWD3Q5JTY5 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CBWD3Q5JTY5 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CBWD3Q5JTY5 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.39■■□□□ 1.18
CBWD3Q5JTY5 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CBWD3Q5JTY5 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC22.39■■□□□ 1.18
CBWD3Q5JTY5 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC22.39■■□□□ 1.17
CBWD3Q5JTY5 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC22.39■■□□□ 1.17
CBWD3Q5JTY5 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CBWD3Q5JTY5 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC22.39■■□□□ 1.17
CBWD3Q5JTY5 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.39■■□□□ 1.17
CBWD3Q5JTY5 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CBWD3Q5JTY5 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CBWD3Q5JTY5 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC22.39■■□□□ 1.17
CBWD3Q5JTY5 MIR5787-201ENST00000611784 55 ntBASIC22.39■■□□□ 1.17
CBWD3Q5JTY5 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CBWD3Q5JTY5 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CBWD3Q5JTY5 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CBWD3Q5JTY5 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CBWD3Q5JTY5 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.39■■□□□ 1.17
CBWD3Q5JTY5 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.39■■□□□ 1.17
CBWD3Q5JTY5 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC22.39■■□□□ 1.17
CBWD3Q5JTY5 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
CBWD3Q5JTY5 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC22.39■■□□□ 1.17
CBWD3Q5JTY5 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CBWD3Q5JTY5 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CBWD3Q5JTY5 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC22.38■■□□□ 1.17
CBWD3Q5JTY5 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CBWD3Q5JTY5 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms