Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
FREM1Q5H8C1 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FREM1Q5H8C1 AC073210.2-201ENST00000430369 194 ntBASIC18.3■□□□□ 0.52
FREM1Q5H8C1 AL138781.1-201ENST00000566567 1274 ntBASIC18.3■□□□□ 0.52
FREM1Q5H8C1 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.3■□□□□ 0.52
FREM1Q5H8C1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
FREM1Q5H8C1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
FREM1Q5H8C1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FREM1Q5H8C1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.3■□□□□ 0.52
FREM1Q5H8C1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FREM1Q5H8C1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
FREM1Q5H8C1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FREM1Q5H8C1 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
FREM1Q5H8C1 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
FREM1Q5H8C1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
FREM1Q5H8C1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FREM1Q5H8C1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
FREM1Q5H8C1 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
FREM1Q5H8C1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FREM1Q5H8C1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FREM1Q5H8C1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FREM1Q5H8C1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FREM1Q5H8C1 AL512625.2-201ENST00000417533 625 ntBASIC18.29■□□□□ 0.52
FREM1Q5H8C1 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FREM1Q5H8C1 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.29■□□□□ 0.52
FREM1Q5H8C1 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.29■□□□□ 0.52
FREM1Q5H8C1 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.29■□□□□ 0.52
FREM1Q5H8C1 AC079834.2-201ENST00000609776 1949 ntBASIC18.29■□□□□ 0.52
FREM1Q5H8C1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FREM1Q5H8C1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
FREM1Q5H8C1 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.29■□□□□ 0.52
FREM1Q5H8C1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FREM1Q5H8C1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FREM1Q5H8C1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.28■□□□□ 0.52
FREM1Q5H8C1 AC105036.2-201ENST00000569468 176 ntBASIC18.28■□□□□ 0.52
FREM1Q5H8C1 AL121832.2-201ENST00000610979 668 ntBASIC18.28■□□□□ 0.52
FREM1Q5H8C1 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FREM1Q5H8C1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FREM1Q5H8C1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.28■□□□□ 0.52
FREM1Q5H8C1 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
FREM1Q5H8C1 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.28■□□□□ 0.52
FREM1Q5H8C1 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FREM1Q5H8C1 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FREM1Q5H8C1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FREM1Q5H8C1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
FREM1Q5H8C1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.27■□□□□ 0.52
FREM1Q5H8C1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.27■□□□□ 0.52
FREM1Q5H8C1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
FREM1Q5H8C1 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FREM1Q5H8C1 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.27■□□□□ 0.52
FREM1Q5H8C1 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.27■□□□□ 0.52
FREM1Q5H8C1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FREM1Q5H8C1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.27■□□□□ 0.52
FREM1Q5H8C1 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
FREM1Q5H8C1 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
FREM1Q5H8C1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.27■□□□□ 0.51
FREM1Q5H8C1 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.27■□□□□ 0.51
FREM1Q5H8C1 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.27■□□□□ 0.51
FREM1Q5H8C1 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.27■□□□□ 0.51
FREM1Q5H8C1 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.27■□□□□ 0.51
FREM1Q5H8C1 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.27■□□□□ 0.51
FREM1Q5H8C1 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.27■□□□□ 0.51
FREM1Q5H8C1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.27■□□□□ 0.51
FREM1Q5H8C1 AL591742.1-201ENST00000604433 565 ntBASIC18.27■□□□□ 0.51
FREM1Q5H8C1 OR10C1-204ENST00000622521 1039 ntBASIC18.27■□□□□ 0.51
FREM1Q5H8C1 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.27■□□□□ 0.51
FREM1Q5H8C1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
FREM1Q5H8C1 AC010980.2-201ENST00000587099 1412 ntBASIC18.26■□□□□ 0.51
FREM1Q5H8C1 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.26■□□□□ 0.51
FREM1Q5H8C1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
FREM1Q5H8C1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.26■□□□□ 0.51
FREM1Q5H8C1 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FREM1Q5H8C1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.26■□□□□ 0.51
FREM1Q5H8C1 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.26■□□□□ 0.51
FREM1Q5H8C1 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FREM1Q5H8C1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
FREM1Q5H8C1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FREM1Q5H8C1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
FREM1Q5H8C1 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FREM1Q5H8C1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FREM1Q5H8C1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.25■□□□□ 0.51
FREM1Q5H8C1 TSPY6P-201ENST00000448518 926 ntBASIC18.25■□□□□ 0.51
FREM1Q5H8C1 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.25■□□□□ 0.51
FREM1Q5H8C1 AC083880.1-201ENST00000608266 535 ntBASIC18.25■□□□□ 0.51
FREM1Q5H8C1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
FREM1Q5H8C1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.25■□□□□ 0.51
FREM1Q5H8C1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
FREM1Q5H8C1 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FREM1Q5H8C1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.25■□□□□ 0.51
FREM1Q5H8C1 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FREM1Q5H8C1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.25■□□□□ 0.51
FREM1Q5H8C1 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FREM1Q5H8C1 DUSP5P2-201ENST00000426873 1033 ntBASIC18.25■□□□□ 0.51
FREM1Q5H8C1 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.25■□□□□ 0.51
FREM1Q5H8C1 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FREM1Q5H8C1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
FREM1Q5H8C1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
FREM1Q5H8C1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
FREM1Q5H8C1 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
FREM1Q5H8C1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms