Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC24.34■■□□□ 1.49
SHROOM1Q2M3G4 AC100791.3-201ENST00000617619 330 ntBASIC24.34■■□□□ 1.49
SHROOM1Q2M3G4 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC24.34■■□□□ 1.49
SHROOM1Q2M3G4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SHROOM1Q2M3G4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SHROOM1Q2M3G4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC24.34■■□□□ 1.49
SHROOM1Q2M3G4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
SHROOM1Q2M3G4 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SHROOM1Q2M3G4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SHROOM1Q2M3G4 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SHROOM1Q2M3G4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SHROOM1Q2M3G4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SHROOM1Q2M3G4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC24.33■■□□□ 1.49
SHROOM1Q2M3G4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SHROOM1Q2M3G4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SHROOM1Q2M3G4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SHROOM1Q2M3G4 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC24.33■■□□□ 1.49
SHROOM1Q2M3G4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.33■■□□□ 1.49
SHROOM1Q2M3G4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC24.33■■□□□ 1.49
SHROOM1Q2M3G4 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC24.33■■□□□ 1.49
SHROOM1Q2M3G4 AC073648.6-201ENST00000641589 218 ntBASIC24.33■■□□□ 1.49
SHROOM1Q2M3G4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.48
SHROOM1Q2M3G4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.48
SHROOM1Q2M3G4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.48
SHROOM1Q2M3G4 CYP21A1P-202ENST00000354927 1481 ntBASIC24.32■■□□□ 1.48
SHROOM1Q2M3G4 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SHROOM1Q2M3G4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SHROOM1Q2M3G4 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC24.32■■□□□ 1.48
SHROOM1Q2M3G4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
SHROOM1Q2M3G4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SHROOM1Q2M3G4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
SHROOM1Q2M3G4 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC24.32■■□□□ 1.48
SHROOM1Q2M3G4 AC026366.1-201ENST00000488803 879 ntBASIC24.32■■□□□ 1.48
SHROOM1Q2M3G4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SHROOM1Q2M3G4 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SHROOM1Q2M3G4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC24.32■■□□□ 1.48
SHROOM1Q2M3G4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC24.32■■□□□ 1.48
SHROOM1Q2M3G4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SHROOM1Q2M3G4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SHROOM1Q2M3G4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC24.31■■□□□ 1.48
SHROOM1Q2M3G4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SHROOM1Q2M3G4 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC24.31■■□□□ 1.48
SHROOM1Q2M3G4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC24.31■■□□□ 1.48
SHROOM1Q2M3G4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SHROOM1Q2M3G4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SHROOM1Q2M3G4 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SHROOM1Q2M3G4 KRT18P68-201ENST00000392293 1000 ntBASIC24.31■■□□□ 1.48
SHROOM1Q2M3G4 SAPCD2P1-201ENST00000395413 1184 ntBASIC24.31■■□□□ 1.48
SHROOM1Q2M3G4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC24.31■■□□□ 1.48
SHROOM1Q2M3G4 AP003097.1-201ENST00000530657 1135 ntBASIC24.31■■□□□ 1.48
SHROOM1Q2M3G4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
SHROOM1Q2M3G4 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SHROOM1Q2M3G4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
SHROOM1Q2M3G4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC24.31■■□□□ 1.48
SHROOM1Q2M3G4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC24.31■■□□□ 1.48
SHROOM1Q2M3G4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SHROOM1Q2M3G4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SHROOM1Q2M3G4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
SHROOM1Q2M3G4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
SHROOM1Q2M3G4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SHROOM1Q2M3G4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
SHROOM1Q2M3G4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SHROOM1Q2M3G4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
SHROOM1Q2M3G4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC24.3■■□□□ 1.48
SHROOM1Q2M3G4 AL158047.1-201ENST00000445918 881 ntBASIC24.3■■□□□ 1.48
SHROOM1Q2M3G4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC24.3■■□□□ 1.48
SHROOM1Q2M3G4 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC24.3■■□□□ 1.48
SHROOM1Q2M3G4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
SHROOM1Q2M3G4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SHROOM1Q2M3G4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SHROOM1Q2M3G4 AC133561.1-201ENST00000568600 2415 ntBASIC24.3■■□□□ 1.48
SHROOM1Q2M3G4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC24.3■■□□□ 1.48
SHROOM1Q2M3G4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC24.29■■□□□ 1.48
SHROOM1Q2M3G4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC24.29■■□□□ 1.48
SHROOM1Q2M3G4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC24.29■■□□□ 1.48
SHROOM1Q2M3G4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SHROOM1Q2M3G4 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC24.29■■□□□ 1.48
SHROOM1Q2M3G4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
SHROOM1Q2M3G4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC24.29■■□□□ 1.48
SHROOM1Q2M3G4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
SHROOM1Q2M3G4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC24.29■■□□□ 1.48
SHROOM1Q2M3G4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SHROOM1Q2M3G4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SHROOM1Q2M3G4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SHROOM1Q2M3G4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC24.29■■□□□ 1.48
SHROOM1Q2M3G4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SHROOM1Q2M3G4 ECEL1P1-201ENST00000373592 1742 ntBASIC24.29■■□□□ 1.48
SHROOM1Q2M3G4 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SHROOM1Q2M3G4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SHROOM1Q2M3G4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC24.28■■□□□ 1.48
SHROOM1Q2M3G4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
SHROOM1Q2M3G4 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SHROOM1Q2M3G4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
SHROOM1Q2M3G4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC24.28■■□□□ 1.48
SHROOM1Q2M3G4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
SHROOM1Q2M3G4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
SHROOM1Q2M3G4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
SHROOM1Q2M3G4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC24.28■■□□□ 1.48
SHROOM1Q2M3G4 AC233263.1-201ENST00000578059 224 ntBASIC24.28■■□□□ 1.48
SHROOM1Q2M3G4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC24.28■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms