Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC25.2■■□□□ 1.63
RFX7Q2KHR2 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
RFX7Q2KHR2 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
RFX7Q2KHR2 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
RFX7Q2KHR2 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC25.2■■□□□ 1.62
RFX7Q2KHR2 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
RFX7Q2KHR2 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RFX7Q2KHR2 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
RFX7Q2KHR2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
RFX7Q2KHR2 OR10C1-204ENST00000622521 1039 ntBASIC25.19■■□□□ 1.62
RFX7Q2KHR2 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
RFX7Q2KHR2 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC25.19■■□□□ 1.62
RFX7Q2KHR2 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
RFX7Q2KHR2 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
RFX7Q2KHR2 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
RFX7Q2KHR2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RFX7Q2KHR2 AC245052.3-201ENST00000450182 901 ntBASIC25.18■■□□□ 1.62
RFX7Q2KHR2 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
RFX7Q2KHR2 RGMA-211ENST00000557420 989 ntTSL 3 BASIC25.18■■□□□ 1.62
RFX7Q2KHR2 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC25.18■■□□□ 1.62
RFX7Q2KHR2 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
RFX7Q2KHR2 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC25.18■■□□□ 1.62
RFX7Q2KHR2 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RFX7Q2KHR2 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
RFX7Q2KHR2 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC25.18■■□□□ 1.62
RFX7Q2KHR2 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
RFX7Q2KHR2 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC25.18■■□□□ 1.62
RFX7Q2KHR2 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
RFX7Q2KHR2 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC25.18■■□□□ 1.62
RFX7Q2KHR2 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RFX7Q2KHR2 MIPEPP3-201ENST00000412105 444 ntBASIC25.18■■□□□ 1.62
RFX7Q2KHR2 TSPY20P-201ENST00000450910 630 ntBASIC25.18■■□□□ 1.62
RFX7Q2KHR2 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC25.18■■□□□ 1.62
RFX7Q2KHR2 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
RFX7Q2KHR2 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC25.18■■□□□ 1.62
RFX7Q2KHR2 PALM-207ENST00000590161 2137 ntTSL 4 BASIC25.18■■□□□ 1.62
RFX7Q2KHR2 AC133041.1-202ENST00000642053 222 ntBASIC25.18■■□□□ 1.62
RFX7Q2KHR2 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RFX7Q2KHR2 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC25.17■■□□□ 1.62
RFX7Q2KHR2 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RFX7Q2KHR2 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RFX7Q2KHR2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RFX7Q2KHR2 PHB2-213ENST00000546111 858 ntTSL 2 BASIC25.17■■□□□ 1.62
RFX7Q2KHR2 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RFX7Q2KHR2 MKRN4P-201ENST00000444706 1521 ntBASIC25.17■■□□□ 1.62
RFX7Q2KHR2 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC25.16■■□□□ 1.62
RFX7Q2KHR2 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
RFX7Q2KHR2 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC25.16■■□□□ 1.62
RFX7Q2KHR2 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC25.16■■□□□ 1.62
RFX7Q2KHR2 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC25.16■■□□□ 1.62
RFX7Q2KHR2 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC25.16■■□□□ 1.62
RFX7Q2KHR2 AL162412.1-201ENST00000567129 965 ntBASIC25.16■■□□□ 1.62
RFX7Q2KHR2 AC092118.2-201ENST00000613495 667 ntBASIC25.16■■□□□ 1.62
RFX7Q2KHR2 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
RFX7Q2KHR2 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
RFX7Q2KHR2 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
RFX7Q2KHR2 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
RFX7Q2KHR2 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
RFX7Q2KHR2 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC25.15■■□□□ 1.62
RFX7Q2KHR2 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC25.15■■□□□ 1.62
RFX7Q2KHR2 EXOC3-AS1-202ENST00000623673 1663 ntBASIC25.15■■□□□ 1.62
RFX7Q2KHR2 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
RFX7Q2KHR2 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
RFX7Q2KHR2 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
RFX7Q2KHR2 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
RFX7Q2KHR2 AF106564.1-201ENST00000607058 2553 ntBASIC25.14■■□□□ 1.62
RFX7Q2KHR2 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC25.14■■□□□ 1.62
RFX7Q2KHR2 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
RFX7Q2KHR2 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC25.14■■□□□ 1.62
RFX7Q2KHR2 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC25.14■■□□□ 1.61
RFX7Q2KHR2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
RFX7Q2KHR2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.61
RFX7Q2KHR2 AL512625.2-201ENST00000417533 625 ntBASIC25.14■■□□□ 1.61
RFX7Q2KHR2 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.61
RFX7Q2KHR2 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
RFX7Q2KHR2 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC25.14■■□□□ 1.61
RFX7Q2KHR2 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC25.14■■□□□ 1.61
RFX7Q2KHR2 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC25.14■■□□□ 1.61
RFX7Q2KHR2 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
RFX7Q2KHR2 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC25.14■■□□□ 1.61
RFX7Q2KHR2 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.61
RFX7Q2KHR2 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC25.14■■□□□ 1.61
RFX7Q2KHR2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
RFX7Q2KHR2 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RFX7Q2KHR2 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RFX7Q2KHR2 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC25.13■■□□□ 1.61
RFX7Q2KHR2 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
RFX7Q2KHR2 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
RFX7Q2KHR2 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RFX7Q2KHR2 PPP1R14BP2-201ENST00000426284 444 ntBASIC25.13■■□□□ 1.61
RFX7Q2KHR2 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC25.13■■□□□ 1.61
RFX7Q2KHR2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC25.13■■□□□ 1.61
RFX7Q2KHR2 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC25.13■■□□□ 1.61
RFX7Q2KHR2 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RFX7Q2KHR2 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC25.13■■□□□ 1.61
RFX7Q2KHR2 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RFX7Q2KHR2 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
RFX7Q2KHR2 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RFX7Q2KHR2 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC25.12■■□□□ 1.61
RFX7Q2KHR2 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC25.12■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms