Protein–RNA interactions for Protein: Q08109

HRD1, ERAD-associated E3 ubiquitin-protein ligase HRD1, yeastyeast

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD1Q08109 MGA2YIR033W 3342 nt1.69□□□□□ -2.14
HRD1Q08109 MDM10YAL010C 1482 nt1.69□□□□□ -2.14
HRD1Q08109 TRM82YDR165W 1335 nt1.68□□□□□ -2.14
HRD1Q08109 ATG9YDL149W 2994 nt1.68□□□□□ -2.14
HRD1Q08109 YDL241WYDL241W 372 nt1.68□□□□□ -2.14
HRD1Q08109 CPR5YDR304C 678 nt1.68□□□□□ -2.14
HRD1Q08109 DSE2YHR143W 978 nt1.68□□□□□ -2.14
HRD1Q08109 tT(UGU)HtT(UGU)H 72 nt1.68□□□□□ -2.14
HRD1Q08109 YIR023C-AYIR023C-A 324 nt1.68□□□□□ -2.14
HRD1Q08109 YLL047WYLL047W 384 nt1.68□□□□□ -2.14
HRD1Q08109 UBC12YLR306W 567 nt1.68□□□□□ -2.14
HRD1Q08109 PDS5YMR076C 3834 nt1.68□□□□□ -2.14
HRD1Q08109 MCT1YOR221C 1083 nt1.68□□□□□ -2.14
HRD1Q08109 YPL142CYPL142C 318 nt1.68□□□□□ -2.14
HRD1Q08109 VPS8YAL002W 3825 nt1.68□□□□□ -2.14
HRD1Q08109 RPN3YER021W 1572 nt1.68□□□□□ -2.14
HRD1Q08109 NAB6YML117W 3405 nt1.68□□□□□ -2.14
HRD1Q08109 YLR446WYLR446W 1302 nt1.67□□□□□ -2.14
HRD1Q08109 PDR8YLR266C 2106 nt1.67□□□□□ -2.14
HRD1Q08109 SSP1YHR184W 1716 nt1.67□□□□□ -2.14
HRD1Q08109 MFA1YDR461W 111 nt1.67□□□□□ -2.14
HRD1Q08109 YGR018CYGR018C 330 nt1.67□□□□□ -2.14
HRD1Q08109 RNP1YLL046C 750 nt1.67□□□□□ -2.14
HRD1Q08109 RLP24YLR009W 600 nt1.67□□□□□ -2.14
HRD1Q08109 BET5YML077W 480 nt1.67□□□□□ -2.14
HRD1Q08109 ECM13YBL043W 774 nt1.67□□□□□ -2.14
HRD1Q08109 YMR306C-AYMR306C-A 390 nt1.67□□□□□ -2.14
HRD1Q08109 GCY1YOR120W 939 nt1.67□□□□□ -2.14
HRD1Q08109 ATG5YPL149W 885 nt1.67□□□□□ -2.14
HRD1Q08109 MUM2YBR057C 1101 nt1.67□□□□□ -2.14
HRD1Q08109 MF(ALPHA)1YPL187W 498 nt1.67□□□□□ -2.14
HRD1Q08109 GRX1YCL035C 333 nt1.67□□□□□ -2.14
HRD1Q08109 ARK1YNL020C 1917 nt1.67□□□□□ -2.14
HRD1Q08109 CBF2YGR140W 2871 nt1.67□□□□□ -2.14
HRD1Q08109 CLN2YPL256C 1638 nt1.66□□□□□ -2.14
HRD1Q08109 YEL043WYEL043W 2871 nt1.66□□□□□ -2.14
HRD1Q08109 YOR093CYOR093C 4947 nt1.66□□□□□ -2.14
HRD1Q08109 BRP1YGL007W 378 nt1.66□□□□□ -2.14
HRD1Q08109 ADH4YGL256W 1149 nt1.66□□□□□ -2.14
HRD1Q08109 YMR181CYMR181C 465 nt1.66□□□□□ -2.14
HRD1Q08109 MUD1YBR119W 897 nt1.66□□□□□ -2.14
HRD1Q08109 YCL001W-AYCL001W-A 462 nt1.66□□□□□ -2.14
HRD1Q08109 RRP7YCL031C 894 nt1.66□□□□□ -2.14
HRD1Q08109 ECM5YMR176W 4236 nt1.66□□□□□ -2.14
HRD1Q08109 SYO1YDL063C 1863 nt1.66□□□□□ -2.14
HRD1Q08109 REV1YOR346W 2958 nt1.66□□□□□ -2.14
HRD1Q08109 YNL144CYNL144C 2223 nt1.66□□□□□ -2.14
HRD1Q08109 PUF4YGL014W 2667 nt1.65□□□□□ -2.14
HRD1Q08109 IPT1YDR072C 1584 nt1.65□□□□□ -2.15
HRD1Q08109 REV3YPL167C 4515 nt1.65□□□□□ -2.15
HRD1Q08109 YDL186WYDL186W 834 nt1.65□□□□□ -2.15
HRD1Q08109 RSM24YDR175C 960 nt1.65□□□□□ -2.15
HRD1Q08109 SDC1YDR469W 528 nt1.65□□□□□ -2.15
HRD1Q08109 DIG2YDR480W 972 nt1.65□□□□□ -2.15
HRD1Q08109 SEC4YFL005W 648 nt1.65□□□□□ -2.15
HRD1Q08109 NYV1YLR093C 762 nt1.65□□□□□ -2.15
HRD1Q08109 URA5YML106W 681 nt1.65□□□□□ -2.15
HRD1Q08109 GYP5YPL249C 2685 nt1.65□□□□□ -2.15
HRD1Q08109 SEC31YDL195W 3822 nt1.65□□□□□ -2.15
HRD1Q08109 UTP21YLR409C 2820 nt1.64□□□□□ -2.15
HRD1Q08109 HOP1YIL072W 1818 nt1.64□□□□□ -2.15
HRD1Q08109 RTT101YJL047C 2529 nt1.64□□□□□ -2.15
HRD1Q08109 YLR035C-AYLR035C-A 3468 nt1.64□□□□□ -2.15
HRD1Q08109 YDR290WYDR290W 330 nt1.64□□□□□ -2.15
HRD1Q08109 ACB1YGR037C 264 nt1.64□□□□□ -2.15
HRD1Q08109 POP8YBL018C 402 nt1.64□□□□□ -2.15
HRD1Q08109 YPR142CYPR142C 564 nt1.64□□□□□ -2.15
HRD1Q08109 AI4Q0065 1671 nt1.64□□□□□ -2.15
HRD1Q08109 GPI19YDR437W 423 nt1.63□□□□□ -2.15
HRD1Q08109 YIL058WYIL058W 285 nt1.63□□□□□ -2.15
HRD1Q08109 FIP1YJR093C 984 nt1.63□□□□□ -2.15
HRD1Q08109 ATP7YKL016C 525 nt1.63□□□□□ -2.15
HRD1Q08109 RGM1YMR182C 636 nt1.63□□□□□ -2.15
HRD1Q08109 PNO1YOR145C 825 nt1.63□□□□□ -2.15
HRD1Q08109 YPR014CYPR014C 330 nt1.63□□□□□ -2.15
HRD1Q08109 snR35snR35 204 nt1.63□□□□□ -2.15
HRD1Q08109 VPS15YBR097W 4365 nt1.62□□□□□ -2.15
HRD1Q08109 SET2YJL168C 2202 nt1.62□□□□□ -2.15
HRD1Q08109 AI3Q0060 1248 nt1.62□□□□□ -2.15
HRD1Q08109 YMR31YFR049W 372 nt1.62□□□□□ -2.15
HRD1Q08109 YGL039WYGL039W 1047 nt1.62□□□□□ -2.15
HRD1Q08109 TDA10YGR205W 873 nt1.62□□□□□ -2.15
HRD1Q08109 YHR212CYHR212C 336 nt1.62□□□□□ -2.15
HRD1Q08109 YLR169WYLR169W 354 nt1.62□□□□□ -2.15
HRD1Q08109 YAR060CYAR060C 336 nt1.62□□□□□ -2.15
HRD1Q08109 ARC18YLR370C 537 nt1.62□□□□□ -2.15
HRD1Q08109 YAP7YOL028C 738 nt1.62□□□□□ -2.15
HRD1Q08109 snR191snR191 274 nt1.62□□□□□ -2.15
HRD1Q08109 BUD2YKL092C 3315 nt1.61□□□□□ -2.15
HRD1Q08109 URK1YNR012W 1506 nt1.61□□□□□ -2.15
HRD1Q08109 FUS1YCL027W 1539 nt1.61□□□□□ -2.15
HRD1Q08109 YLR363W-AYLR363W-A 258 nt1.61□□□□□ -2.15
HRD1Q08109 MES1YGR264C 2256 nt1.61□□□□□ -2.15
HRD1Q08109 YFR054CYFR054C 579 nt1.6□□□□□ -2.15
HRD1Q08109 EMP24YGL200C 612 nt1.6□□□□□ -2.15
HRD1Q08109 POP6YGR030C 477 nt1.6□□□□□ -2.15
HRD1Q08109 SIP18YMR175W 240 nt1.6□□□□□ -2.15
HRD1Q08109 CTL1YMR180C 963 nt1.6□□□□□ -2.15
HRD1Q08109 VTI1YMR197C 654 nt1.6□□□□□ -2.15
HRD1Q08109 RPS10BYMR230W 318 nt1.6□□□□□ -2.15
Retrieved 100 of 7,029 protein–RNA pairs in 16.7 ms