Protein–RNA interactions for Protein: Q08003

RFU1, Regulator of free ubiquitin chains 1, yeastyeast

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFU1Q08003 YNL035CYNL035C 1170 nt1.67□□□□□ -2.14
RFU1Q08003 PDR17YNL264C 1053 nt1.67□□□□□ -2.14
RFU1Q08003 MUD1YBR119W 897 nt1.67□□□□□ -2.14
RFU1Q08003 YNL144CYNL144C 2223 nt1.67□□□□□ -2.14
RFU1Q08003 COBQ0105 1158 nt1.66□□□□□ -2.14
RFU1Q08003 SRN2YLR119W 642 nt1.66□□□□□ -2.14
RFU1Q08003 RBL2YOR265W 321 nt1.66□□□□□ -2.14
RFU1Q08003 ECM5YMR176W 4236 nt1.66□□□□□ -2.14
RFU1Q08003 SET2YJL168C 2202 nt1.66□□□□□ -2.14
RFU1Q08003 TUS1YLR425W 3924 nt1.65□□□□□ -2.14
RFU1Q08003 RTT107YHR154W 3213 nt1.65□□□□□ -2.14
RFU1Q08003 IRC6YFR043C 714 nt1.65□□□□□ -2.15
RFU1Q08003 ACB1YGR037C 264 nt1.65□□□□□ -2.15
RFU1Q08003 YLR311CYLR311C 348 nt1.65□□□□□ -2.15
RFU1Q08003 SRT1YMR101C 1032 nt1.65□□□□□ -2.15
RFU1Q08003 RPL16BYNL069C 597 nt1.65□□□□□ -2.15
RFU1Q08003 YAP7YOL028C 738 nt1.65□□□□□ -2.15
RFU1Q08003 FIG1YBR040W 897 nt1.65□□□□□ -2.15
RFU1Q08003 DPB3YBR278W 606 nt1.65□□□□□ -2.15
RFU1Q08003 PDS5YMR076C 3834 nt1.65□□□□□ -2.15
RFU1Q08003 RUD3YOR216C 1455 nt1.64□□□□□ -2.15
RFU1Q08003 SLY41YOR307C 1362 nt1.64□□□□□ -2.15
RFU1Q08003 YCR013CYCR013C 648 nt1.64□□□□□ -2.15
RFU1Q08003 DAD4YDR320C-A 219 nt1.64□□□□□ -2.15
RFU1Q08003 ERG28YER044C 447 nt1.64□□□□□ -2.15
RFU1Q08003 UPF3YGR072W 1164 nt1.64□□□□□ -2.15
RFU1Q08003 YGR226CYGR226C 210 nt1.64□□□□□ -2.15
RFU1Q08003 YIL058WYIL058W 285 nt1.64□□□□□ -2.15
RFU1Q08003 RPA12YJR063W 378 nt1.64□□□□□ -2.15
RFU1Q08003 URA5YML106W 681 nt1.64□□□□□ -2.15
RFU1Q08003 ICY1YMR195W 384 nt1.64□□□□□ -2.15
RFU1Q08003 VTI1YMR197C 654 nt1.64□□□□□ -2.15
RFU1Q08003 YBR201C-AYBR201C-A 204 nt1.64□□□□□ -2.15
RFU1Q08003 HER1YOR227W 3741 nt1.64□□□□□ -2.15
RFU1Q08003 NPR3YHL023C 3441 nt1.63□□□□□ -2.15
RFU1Q08003 HSH155YMR288W 2916 nt1.63□□□□□ -2.15
RFU1Q08003 RPS25AYGR027C 327 nt1.63□□□□□ -2.15
RFU1Q08003 CSM2YIL132C 642 nt1.63□□□□□ -2.15
RFU1Q08003 YML047W-AYML047W-A 366 nt1.63□□□□□ -2.15
RFU1Q08003 BET5YML077W 480 nt1.63□□□□□ -2.15
RFU1Q08003 IAH1YOR126C 717 nt1.63□□□□□ -2.15
RFU1Q08003 UTP21YLR409C 2820 nt1.63□□□□□ -2.15
RFU1Q08003 SSQ1YLR369W 1974 nt1.63□□□□□ -2.15
RFU1Q08003 PKH3YDR466W 2697 nt1.63□□□□□ -2.15
RFU1Q08003 VPS34YLR240W 2628 nt1.62□□□□□ -2.15
RFU1Q08003 RIT1YMR283C 1542 nt1.62□□□□□ -2.15
RFU1Q08003 RPL35BYDL136W 363 nt1.62□□□□□ -2.15
RFU1Q08003 STE2YFL026W 1296 nt1.62□□□□□ -2.15
RFU1Q08003 SAR1YPL218W 573 nt1.62□□□□□ -2.15
RFU1Q08003 CAT2YML042W 2013 nt1.62□□□□□ -2.15
RFU1Q08003 YLR035C-AYLR035C-A 3468 nt1.62□□□□□ -2.15
RFU1Q08003 VPH1YOR270C 2523 nt1.62□□□□□ -2.15
RFU1Q08003 PUF4YGL014W 2667 nt1.61□□□□□ -2.15
RFU1Q08003 YDL026WYDL026W 312 nt1.61□□□□□ -2.15
RFU1Q08003 YGR053CYGR053C 852 nt1.61□□□□□ -2.15
RFU1Q08003 DSE2YHR143W 978 nt1.61□□□□□ -2.15
RFU1Q08003 RGM1YMR182C 636 nt1.61□□□□□ -2.15
RFU1Q08003 YPR074W-AYPR074W-A 171 nt1.61□□□□□ -2.15
RFU1Q08003 YJL016WYJL016W 1686 nt1.61□□□□□ -2.15
RFU1Q08003 MUB1YMR100W 1863 nt1.6□□□□□ -2.15
RFU1Q08003 REV3YPL167C 4515 nt1.6□□□□□ -2.15
RFU1Q08003 ATG11YPR049C 3537 nt1.6□□□□□ -2.15
RFU1Q08003 SAE2YGL175C 1038 nt1.6□□□□□ -2.15
RFU1Q08003 ADH4YGL256W 1149 nt1.6□□□□□ -2.15
RFU1Q08003 MCT1YOR221C 1083 nt1.6□□□□□ -2.15
RFU1Q08003 HOP1YIL072W 1818 nt1.6□□□□□ -2.15
RFU1Q08003 HCS1YKL017C 2052 nt1.6□□□□□ -2.15
RFU1Q08003 PEP1YBL017C 4740 nt1.6□□□□□ -2.15
RFU1Q08003 VPS38YLR360W 1320 nt1.6□□□□□ -2.15
RFU1Q08003 GAL80YML051W 1308 nt1.6□□□□□ -2.15
RFU1Q08003 KAR5YMR065W 1515 nt1.6□□□□□ -2.15
RFU1Q08003 ARK1YNL020C 1917 nt1.6□□□□□ -2.15
RFU1Q08003 UBR2YLR024C 5619 nt1.59□□□□□ -2.15
RFU1Q08003 YCR015CYCR015C 954 nt1.59□□□□□ -2.15
RFU1Q08003 snR63snR63 255 nt1.59□□□□□ -2.15
RFU1Q08003 NNF1YJR112W 606 nt1.59□□□□□ -2.15
RFU1Q08003 YML084WYML084W 309 nt1.59□□□□□ -2.15
RFU1Q08003 YMR181CYMR181C 465 nt1.59□□□□□ -2.15
RFU1Q08003 YIP3YNL044W 531 nt1.59□□□□□ -2.15
RFU1Q08003 YBL096CYBL096C 309 nt1.59□□□□□ -2.15
RFU1Q08003 VPS35YJL154C 2835 nt1.59□□□□□ -2.16
RFU1Q08003 YMR045CYMR045C 5268 nt1.59□□□□□ -2.16
RFU1Q08003 PET100YDR079W 336 nt1.58□□□□□ -2.16
RFU1Q08003 YET2YMR040W 483 nt1.58□□□□□ -2.16
RFU1Q08003 YOR392WYOR392W 444 nt1.58□□□□□ -2.16
RFU1Q08003 YCL023CYCL023C 348 nt1.58□□□□□ -2.16
RFU1Q08003 FUS1YCL027W 1539 nt1.57□□□□□ -2.16
RFU1Q08003 TRL1YJL087C 2484 nt1.57□□□□□ -2.16
RFU1Q08003 snR68snR68 136 nt1.57□□□□□ -2.16
RFU1Q08003 AI3Q0060 1248 nt1.57□□□□□ -2.16
RFU1Q08003 YER068C-AYER068C-A 432 nt1.57□□□□□ -2.16
RFU1Q08003 PGD1YGL025C 1194 nt1.57□□□□□ -2.16
RFU1Q08003 YGL101WYGL101W 648 nt1.57□□□□□ -2.16
RFU1Q08003 NYV1YLR093C 762 nt1.57□□□□□ -2.16
RFU1Q08003 SYM1YLR251W 594 nt1.57□□□□□ -2.16
RFU1Q08003 MRPL44YMR225C 297 nt1.57□□□□□ -2.16
RFU1Q08003 RPC40YPR110C 1008 nt1.57□□□□□ -2.16
RFU1Q08003 YCL007CYCL007C 393 nt1.57□□□□□ -2.16
RFU1Q08003 UTP6YDR449C 1323 nt1.57□□□□□ -2.16
RFU1Q08003 STD1YOR047C 1335 nt1.57□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 43.8 ms