Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAE1P78406 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RAE1P78406 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAE1P78406 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAE1P78406 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RAE1P78406 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAE1P78406 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAE1P78406 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAE1P78406 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAE1P78406 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAE1P78406 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.7■□□□□ 0.74
RAE1P78406 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAE1P78406 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAE1P78406 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.7■□□□□ 0.74
RAE1P78406 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.7■□□□□ 0.74
RAE1P78406 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.7■□□□□ 0.74
RAE1P78406 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.7■□□□□ 0.74
RAE1P78406 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RAE1P78406 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.7■□□□□ 0.74
RAE1P78406 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAE1P78406 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAE1P78406 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RAE1P78406 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RAE1P78406 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAE1P78406 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAE1P78406 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAE1P78406 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
RAE1P78406 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.69■□□□□ 0.74
RAE1P78406 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RAE1P78406 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RAE1P78406 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.69■□□□□ 0.74
RAE1P78406 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.69■□□□□ 0.74
RAE1P78406 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAE1P78406 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.69■□□□□ 0.74
RAE1P78406 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAE1P78406 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RAE1P78406 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RAE1P78406 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.69■□□□□ 0.74
RAE1P78406 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAE1P78406 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAE1P78406 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
RAE1P78406 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RAE1P78406 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAE1P78406 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.69■□□□□ 0.74
RAE1P78406 AC120498.10-201ENST00000621827 505 ntBASIC19.69■□□□□ 0.74
RAE1P78406 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.69■□□□□ 0.74
RAE1P78406 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAE1P78406 AC027702.1-201ENST00000563810 1770 ntBASIC19.69■□□□□ 0.74
RAE1P78406 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAE1P78406 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RAE1P78406 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAE1P78406 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAE1P78406 GABARAPL3-202ENST00000624044 1851 ntBASIC19.69■□□□□ 0.74
RAE1P78406 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAE1P78406 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAE1P78406 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
RAE1P78406 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
RAE1P78406 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAE1P78406 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RAE1P78406 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAE1P78406 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAE1P78406 AC245052.3-201ENST00000450182 901 ntBASIC19.68■□□□□ 0.74
RAE1P78406 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.68■□□□□ 0.74
RAE1P78406 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.68■□□□□ 0.74
RAE1P78406 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.68■□□□□ 0.74
RAE1P78406 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.68■□□□□ 0.74
RAE1P78406 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAE1P78406 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
RAE1P78406 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.68■□□□□ 0.74
RAE1P78406 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAE1P78406 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAE1P78406 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAE1P78406 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RAE1P78406 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAE1P78406 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
RAE1P78406 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.67■□□□□ 0.74
RAE1P78406 KRT18P20-201ENST00000548986 1279 ntBASIC19.67■□□□□ 0.74
RAE1P78406 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
RAE1P78406 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAE1P78406 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAE1P78406 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAE1P78406 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAE1P78406 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAE1P78406 FP700111.2-201ENST00000619190 1892 ntBASIC19.67■□□□□ 0.74
RAE1P78406 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAE1P78406 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAE1P78406 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAE1P78406 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.66■□□□□ 0.74
RAE1P78406 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAE1P78406 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.66■□□□□ 0.74
RAE1P78406 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAE1P78406 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAE1P78406 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAE1P78406 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.66■□□□□ 0.74
RAE1P78406 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAE1P78406 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
RAE1P78406 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RAE1P78406 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RAE1P78406 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAE1P78406 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms