Protein–RNA interactions for Protein: P61163

ACTR1A, Alpha-centractin, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR1AP61163 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ACTR1AP61163 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.28■□□□□ 0.84
ACTR1AP61163 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
ACTR1AP61163 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.28■□□□□ 0.84
ACTR1AP61163 AC007322.3-201ENST00000426526 701 ntBASIC20.28■□□□□ 0.84
ACTR1AP61163 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.28■□□□□ 0.84
ACTR1AP61163 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.28■□□□□ 0.84
ACTR1AP61163 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ACTR1AP61163 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ACTR1AP61163 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
ACTR1AP61163 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
ACTR1AP61163 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ACTR1AP61163 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
ACTR1AP61163 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.27■□□□□ 0.84
ACTR1AP61163 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.27■□□□□ 0.84
ACTR1AP61163 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACTR1AP61163 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.27■□□□□ 0.84
ACTR1AP61163 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACTR1AP61163 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACTR1AP61163 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.27■□□□□ 0.84
ACTR1AP61163 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACTR1AP61163 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACTR1AP61163 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACTR1AP61163 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.27■□□□□ 0.84
ACTR1AP61163 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACTR1AP61163 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACTR1AP61163 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.27■□□□□ 0.84
ACTR1AP61163 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.27■□□□□ 0.84
ACTR1AP61163 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
ACTR1AP61163 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.27■□□□□ 0.84
ACTR1AP61163 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.27■□□□□ 0.84
ACTR1AP61163 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ACTR1AP61163 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
ACTR1AP61163 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACTR1AP61163 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.26■□□□□ 0.83
ACTR1AP61163 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ACTR1AP61163 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
ACTR1AP61163 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACTR1AP61163 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ACTR1AP61163 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.26■□□□□ 0.83
ACTR1AP61163 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.26■□□□□ 0.83
ACTR1AP61163 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.26■□□□□ 0.83
ACTR1AP61163 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.26■□□□□ 0.83
ACTR1AP61163 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACTR1AP61163 AC244015.2-201ENST00000616358 1861 ntBASIC20.26■□□□□ 0.83
ACTR1AP61163 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.26■□□□□ 0.83
ACTR1AP61163 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACTR1AP61163 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
ACTR1AP61163 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ACTR1AP61163 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.25■□□□□ 0.83
ACTR1AP61163 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
ACTR1AP61163 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ACTR1AP61163 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
ACTR1AP61163 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
ACTR1AP61163 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ACTR1AP61163 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ACTR1AP61163 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ACTR1AP61163 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ACTR1AP61163 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ACTR1AP61163 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.25■□□□□ 0.83
ACTR1AP61163 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.25■□□□□ 0.83
ACTR1AP61163 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.25■□□□□ 0.83
ACTR1AP61163 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ACTR1AP61163 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.25■□□□□ 0.83
ACTR1AP61163 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.25■□□□□ 0.83
ACTR1AP61163 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
ACTR1AP61163 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
ACTR1AP61163 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
ACTR1AP61163 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ACTR1AP61163 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ACTR1AP61163 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ACTR1AP61163 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.24■□□□□ 0.83
ACTR1AP61163 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ACTR1AP61163 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ACTR1AP61163 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ACTR1AP61163 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.24■□□□□ 0.83
ACTR1AP61163 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ACTR1AP61163 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.24■□□□□ 0.83
ACTR1AP61163 LSM12P1-201ENST00000411836 588 ntBASIC20.24■□□□□ 0.83
ACTR1AP61163 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.24■□□□□ 0.83
ACTR1AP61163 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.24■□□□□ 0.83
ACTR1AP61163 AL355472.2-201ENST00000422958 438 ntBASIC20.24■□□□□ 0.83
ACTR1AP61163 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
ACTR1AP61163 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.24■□□□□ 0.83
ACTR1AP61163 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
ACTR1AP61163 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ACTR1AP61163 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ACTR1AP61163 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.24■□□□□ 0.83
ACTR1AP61163 AC116050.2-201ENST00000612102 1779 ntBASIC20.23■□□□□ 0.83
ACTR1AP61163 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ACTR1AP61163 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ACTR1AP61163 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ACTR1AP61163 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.23■□□□□ 0.83
ACTR1AP61163 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ACTR1AP61163 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.23■□□□□ 0.83
ACTR1AP61163 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.23■□□□□ 0.83
ACTR1AP61163 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ACTR1AP61163 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.23■□□□□ 0.83
ACTR1AP61163 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.23■□□□□ 0.83
ACTR1AP61163 AC100791.3-201ENST00000617619 330 ntBASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms