Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 KRT18P11-201ENST00000435214 1283 ntBASIC18.97■□□□□ 0.63
CLDN20P56880 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN20P56880 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.97■□□□□ 0.63
CLDN20P56880 SLC7A5P2-201ENST00000553010 536 ntBASIC18.97■□□□□ 0.63
CLDN20P56880 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.97■□□□□ 0.63
CLDN20P56880 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
CLDN20P56880 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CLDN20P56880 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CLDN20P56880 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN20P56880 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.97■□□□□ 0.63
CLDN20P56880 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN20P56880 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN20P56880 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN20P56880 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CLDN20P56880 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN20P56880 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN20P56880 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.96■□□□□ 0.63
CLDN20P56880 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN20P56880 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
CLDN20P56880 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN20P56880 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CLDN20P56880 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN20P56880 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN20P56880 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN20P56880 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.96■□□□□ 0.63
CLDN20P56880 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.96■□□□□ 0.63
CLDN20P56880 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN20P56880 BID-214ENST00000617586 542 ntTSL 5 BASIC18.96■□□□□ 0.63
CLDN20P56880 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
CLDN20P56880 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN20P56880 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CLDN20P56880 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.96■□□□□ 0.63
CLDN20P56880 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CLDN20P56880 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN20P56880 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.96■□□□□ 0.63
CLDN20P56880 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN20P56880 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN20P56880 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN20P56880 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN20P56880 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.95■□□□□ 0.62
CLDN20P56880 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.95■□□□□ 0.62
CLDN20P56880 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN20P56880 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN20P56880 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CLDN20P56880 AC061975.6-201ENST00000579045 1553 ntBASIC18.95■□□□□ 0.62
CLDN20P56880 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.95■□□□□ 0.62
CLDN20P56880 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN20P56880 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.95■□□□□ 0.62
CLDN20P56880 KRT18P20-201ENST00000548986 1279 ntBASIC18.95■□□□□ 0.62
CLDN20P56880 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.95■□□□□ 0.62
CLDN20P56880 AC080038.1-201ENST00000611274 1154 ntBASIC18.95■□□□□ 0.62
CLDN20P56880 AC008175.2-201ENST00000612840 297 ntBASIC18.95■□□□□ 0.62
CLDN20P56880 AC011767.1-201ENST00000617410 1153 ntBASIC18.95■□□□□ 0.62
CLDN20P56880 MYCNOS-205ENST00000641950 531 ntBASIC18.95■□□□□ 0.62
CLDN20P56880 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CLDN20P56880 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN20P56880 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.95■□□□□ 0.62
CLDN20P56880 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN20P56880 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.95■□□□□ 0.62
CLDN20P56880 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CLDN20P56880 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.95■□□□□ 0.62
CLDN20P56880 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CLDN20P56880 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN20P56880 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN20P56880 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN20P56880 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN20P56880 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN20P56880 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN20P56880 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CLDN20P56880 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN20P56880 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CLDN20P56880 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN20P56880 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CLDN20P56880 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN20P56880 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CLDN20P56880 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN20P56880 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN20P56880 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN20P56880 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN20P56880 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN20P56880 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN20P56880 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.94■□□□□ 0.62
CLDN20P56880 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.94■□□□□ 0.62
CLDN20P56880 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.94■□□□□ 0.62
CLDN20P56880 MFSD11-216ENST00000590393 1141 ntBASIC18.94■□□□□ 0.62
CLDN20P56880 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.94■□□□□ 0.62
CLDN20P56880 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.94■□□□□ 0.62
CLDN20P56880 RARRES2P11-201ENST00000635158 484 ntBASIC18.94■□□□□ 0.62
CLDN20P56880 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN20P56880 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN20P56880 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN20P56880 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN20P56880 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN20P56880 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
CLDN20P56880 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN20P56880 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.93■□□□□ 0.62
CLDN20P56880 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN20P56880 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN20P56880 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN20P56880 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms