Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDH13P55290 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDH13P55290 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH13P55290 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH13P55290 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH13P55290 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH13P55290 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH13P55290 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CDH13P55290 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH13P55290 GABARAPL3-202ENST00000624044 1851 ntBASIC20.25■□□□□ 0.83
CDH13P55290 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH13P55290 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH13P55290 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.25■□□□□ 0.83
CDH13P55290 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDH13P55290 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH13P55290 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH13P55290 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH13P55290 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH13P55290 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CDH13P55290 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH13P55290 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CDH13P55290 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CDH13P55290 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
CDH13P55290 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH13P55290 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH13P55290 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.24■□□□□ 0.83
CDH13P55290 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDH13P55290 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH13P55290 PCDHAC2-203ENST00000615316 3011 ntBASIC20.24■□□□□ 0.83
CDH13P55290 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDH13P55290 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH13P55290 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDH13P55290 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH13P55290 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.24■□□□□ 0.83
CDH13P55290 AC142381.2-201ENST00000566120 298 ntBASIC20.24■□□□□ 0.83
CDH13P55290 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.24■□□□□ 0.83
CDH13P55290 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDH13P55290 AC007225.1-201ENST00000566331 1836 ntBASIC20.24■□□□□ 0.83
CDH13P55290 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CDH13P55290 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH13P55290 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDH13P55290 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDH13P55290 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH13P55290 AC027702.1-201ENST00000563810 1770 ntBASIC20.23■□□□□ 0.83
CDH13P55290 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CDH13P55290 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CDH13P55290 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CDH13P55290 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH13P55290 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH13P55290 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDH13P55290 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH13P55290 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
CDH13P55290 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.23■□□□□ 0.83
CDH13P55290 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.23■□□□□ 0.83
CDH13P55290 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.23■□□□□ 0.83
CDH13P55290 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDH13P55290 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDH13P55290 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.23■□□□□ 0.83
CDH13P55290 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDH13P55290 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDH13P55290 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDH13P55290 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH13P55290 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH13P55290 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CDH13P55290 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CDH13P55290 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH13P55290 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.22■□□□□ 0.83
CDH13P55290 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.22■□□□□ 0.83
CDH13P55290 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CDH13P55290 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH13P55290 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CDH13P55290 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH13P55290 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH13P55290 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDH13P55290 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
CDH13P55290 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.22■□□□□ 0.83
CDH13P55290 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CDH13P55290 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.22■□□□□ 0.83
CDH13P55290 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.22■□□□□ 0.83
CDH13P55290 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH13P55290 AP004607.4-201ENST00000530158 1459 ntBASIC20.22■□□□□ 0.83
CDH13P55290 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH13P55290 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDH13P55290 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDH13P55290 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH13P55290 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.21■□□□□ 0.83
CDH13P55290 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH13P55290 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH13P55290 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CDH13P55290 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH13P55290 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH13P55290 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH13P55290 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDH13P55290 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.21■□□□□ 0.83
CDH13P55290 AL358852.1-201ENST00000623174 1268 ntBASIC20.21■□□□□ 0.83
CDH13P55290 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.21■□□□□ 0.83
CDH13P55290 FP700111.2-201ENST00000619190 1892 ntBASIC20.21■□□□□ 0.83
CDH13P55290 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDH13P55290 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH13P55290 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms