Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.55■□□□□ 0.72
NR1H2P55055 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NR1H2P55055 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NR1H2P55055 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.55■□□□□ 0.72
NR1H2P55055 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NR1H2P55055 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
NR1H2P55055 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NR1H2P55055 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
NR1H2P55055 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.54■□□□□ 0.72
NR1H2P55055 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
NR1H2P55055 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
NR1H2P55055 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NR1H2P55055 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NR1H2P55055 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NR1H2P55055 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NR1H2P55055 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NR1H2P55055 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.54■□□□□ 0.72
NR1H2P55055 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
NR1H2P55055 AC026271.2-201ENST00000428091 497 ntBASIC19.54■□□□□ 0.72
NR1H2P55055 MIR5787-201ENST00000611784 55 ntBASIC19.54■□□□□ 0.72
NR1H2P55055 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NR1H2P55055 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.54■□□□□ 0.72
NR1H2P55055 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NR1H2P55055 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
NR1H2P55055 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NR1H2P55055 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NR1H2P55055 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NR1H2P55055 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NR1H2P55055 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
NR1H2P55055 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NR1H2P55055 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
NR1H2P55055 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
NR1H2P55055 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NR1H2P55055 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
NR1H2P55055 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NR1H2P55055 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NR1H2P55055 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.53■□□□□ 0.72
NR1H2P55055 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.53■□□□□ 0.72
NR1H2P55055 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
NR1H2P55055 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NR1H2P55055 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NR1H2P55055 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.53■□□□□ 0.72
NR1H2P55055 AC008764.7-201ENST00000593779 1081 ntBASIC19.53■□□□□ 0.72
NR1H2P55055 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.53■□□□□ 0.72
NR1H2P55055 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.53■□□□□ 0.72
NR1H2P55055 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.53■□□□□ 0.72
NR1H2P55055 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NR1H2P55055 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NR1H2P55055 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.53■□□□□ 0.72
NR1H2P55055 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NR1H2P55055 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NR1H2P55055 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NR1H2P55055 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NR1H2P55055 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
NR1H2P55055 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NR1H2P55055 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
NR1H2P55055 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
NR1H2P55055 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
NR1H2P55055 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NR1H2P55055 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NR1H2P55055 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
NR1H2P55055 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
NR1H2P55055 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
NR1H2P55055 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NR1H2P55055 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NR1H2P55055 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NR1H2P55055 MIR3181-201ENST00000578512 73 ntBASIC19.52■□□□□ 0.72
NR1H2P55055 AC104564.3-201ENST00000582367 638 ntBASIC19.52■□□□□ 0.72
NR1H2P55055 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.52■□□□□ 0.72
NR1H2P55055 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
NR1H2P55055 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NR1H2P55055 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NR1H2P55055 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NR1H2P55055 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NR1H2P55055 AC098818.2-201ENST00000564925 2320 ntBASIC19.52■□□□□ 0.71
NR1H2P55055 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
NR1H2P55055 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
NR1H2P55055 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.71
NR1H2P55055 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
NR1H2P55055 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NR1H2P55055 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
NR1H2P55055 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NR1H2P55055 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.51■□□□□ 0.71
NR1H2P55055 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NR1H2P55055 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NR1H2P55055 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NR1H2P55055 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NR1H2P55055 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NR1H2P55055 AC099791.1-201ENST00000416440 715 ntBASIC19.51■□□□□ 0.71
NR1H2P55055 BX842568.3-201ENST00000418104 571 ntBASIC19.51■□□□□ 0.71
NR1H2P55055 AC006455.2-201ENST00000429931 906 ntBASIC19.51■□□□□ 0.71
NR1H2P55055 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NR1H2P55055 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NR1H2P55055 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.51■□□□□ 0.71
NR1H2P55055 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.51■□□□□ 0.71
NR1H2P55055 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.51■□□□□ 0.71
NR1H2P55055 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NR1H2P55055 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NR1H2P55055 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
NR1H2P55055 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms