Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLK3P49761 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CLK3P49761 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CLK3P49761 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLK3P49761 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.56■□□□□ 0.72
CLK3P49761 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.56■□□□□ 0.72
CLK3P49761 TPRG1LP1-201ENST00000598702 760 ntBASIC19.56■□□□□ 0.72
CLK3P49761 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLK3P49761 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLK3P49761 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLK3P49761 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.56■□□□□ 0.72
CLK3P49761 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLK3P49761 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLK3P49761 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLK3P49761 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CLK3P49761 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CLK3P49761 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLK3P49761 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLK3P49761 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
CLK3P49761 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
CLK3P49761 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLK3P49761 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLK3P49761 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLK3P49761 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLK3P49761 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.55■□□□□ 0.72
CLK3P49761 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.55■□□□□ 0.72
CLK3P49761 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.55■□□□□ 0.72
CLK3P49761 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.55■□□□□ 0.72
CLK3P49761 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.55■□□□□ 0.72
CLK3P49761 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CLK3P49761 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLK3P49761 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLK3P49761 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLK3P49761 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLK3P49761 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLK3P49761 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLK3P49761 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.54■□□□□ 0.72
CLK3P49761 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
CLK3P49761 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLK3P49761 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLK3P49761 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.54■□□□□ 0.72
CLK3P49761 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CLK3P49761 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.54■□□□□ 0.72
CLK3P49761 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLK3P49761 AC079140.4-201ENST00000507448 529 ntBASIC19.54■□□□□ 0.72
CLK3P49761 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.54■□□□□ 0.72
CLK3P49761 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.54■□□□□ 0.72
CLK3P49761 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.54■□□□□ 0.72
CLK3P49761 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLK3P49761 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLK3P49761 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.54■□□□□ 0.72
CLK3P49761 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLK3P49761 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CLK3P49761 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CLK3P49761 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLK3P49761 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLK3P49761 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLK3P49761 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CLK3P49761 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLK3P49761 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.53■□□□□ 0.72
CLK3P49761 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLK3P49761 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLK3P49761 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLK3P49761 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLK3P49761 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CLK3P49761 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CLK3P49761 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.53■□□□□ 0.72
CLK3P49761 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLK3P49761 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.53■□□□□ 0.72
CLK3P49761 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLK3P49761 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
CLK3P49761 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.53■□□□□ 0.72
CLK3P49761 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.53■□□□□ 0.72
CLK3P49761 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLK3P49761 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.53■□□□□ 0.72
CLK3P49761 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.53■□□□□ 0.72
CLK3P49761 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLK3P49761 AC055733.4-201ENST00000638462 1354 ntBASIC19.53■□□□□ 0.72
CLK3P49761 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLK3P49761 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.53■□□□□ 0.72
CLK3P49761 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.53■□□□□ 0.72
CLK3P49761 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLK3P49761 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLK3P49761 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLK3P49761 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.53■□□□□ 0.72
CLK3P49761 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLK3P49761 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CLK3P49761 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLK3P49761 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.52■□□□□ 0.72
CLK3P49761 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.52■□□□□ 0.72
CLK3P49761 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLK3P49761 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CLK3P49761 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLK3P49761 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLK3P49761 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.52■□□□□ 0.72
CLK3P49761 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLK3P49761 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CLK3P49761 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLK3P49761 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.71
CLK3P49761 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms