Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRIM2P49643 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRIM2P49643 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PRIM2P49643 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRIM2P49643 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRIM2P49643 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRIM2P49643 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PRIM2P49643 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRIM2P49643 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PRIM2P49643 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRIM2P49643 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRIM2P49643 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRIM2P49643 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
PRIM2P49643 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PRIM2P49643 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.65■□□□□ 0.74
PRIM2P49643 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
PRIM2P49643 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PRIM2P49643 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRIM2P49643 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRIM2P49643 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PRIM2P49643 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.65■□□□□ 0.74
PRIM2P49643 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.65■□□□□ 0.74
PRIM2P49643 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.65■□□□□ 0.74
PRIM2P49643 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRIM2P49643 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.65■□□□□ 0.74
PRIM2P49643 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.65■□□□□ 0.74
PRIM2P49643 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRIM2P49643 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRIM2P49643 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
PRIM2P49643 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.65■□□□□ 0.74
PRIM2P49643 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.64■□□□□ 0.74
PRIM2P49643 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.64■□□□□ 0.74
PRIM2P49643 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PRIM2P49643 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRIM2P49643 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRIM2P49643 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRIM2P49643 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
PRIM2P49643 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PRIM2P49643 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRIM2P49643 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.64■□□□□ 0.73
PRIM2P49643 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PRIM2P49643 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRIM2P49643 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRIM2P49643 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
PRIM2P49643 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.63■□□□□ 0.73
PRIM2P49643 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.63■□□□□ 0.73
PRIM2P49643 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRIM2P49643 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRIM2P49643 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
PRIM2P49643 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRIM2P49643 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRIM2P49643 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.63■□□□□ 0.73
PRIM2P49643 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRIM2P49643 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRIM2P49643 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRIM2P49643 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.63■□□□□ 0.73
PRIM2P49643 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.63■□□□□ 0.73
PRIM2P49643 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PRIM2P49643 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PRIM2P49643 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRIM2P49643 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PRIM2P49643 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRIM2P49643 AC027612.3-201ENST00000413684 1047 ntBASIC19.63■□□□□ 0.73
PRIM2P49643 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.63■□□□□ 0.73
PRIM2P49643 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.63■□□□□ 0.73
PRIM2P49643 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.63■□□□□ 0.73
PRIM2P49643 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRIM2P49643 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PRIM2P49643 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRIM2P49643 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PRIM2P49643 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRIM2P49643 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRIM2P49643 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRIM2P49643 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRIM2P49643 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PRIM2P49643 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PRIM2P49643 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.62■□□□□ 0.73
PRIM2P49643 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRIM2P49643 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PRIM2P49643 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRIM2P49643 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PRIM2P49643 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.62■□□□□ 0.73
PRIM2P49643 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PRIM2P49643 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRIM2P49643 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PRIM2P49643 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
PRIM2P49643 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PRIM2P49643 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.62■□□□□ 0.73
PRIM2P49643 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRIM2P49643 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.62■□□□□ 0.73
PRIM2P49643 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRIM2P49643 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRIM2P49643 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PRIM2P49643 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRIM2P49643 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
PRIM2P49643 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.61■□□□□ 0.73
PRIM2P49643 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.61■□□□□ 0.73
PRIM2P49643 AC053503.5-201ENST00000601508 636 ntBASIC19.61■□□□□ 0.73
PRIM2P49643 LINC01006-201ENST00000333319 2292 ntBASIC19.61■□□□□ 0.73
PRIM2P49643 AC006128.1-201ENST00000624704 1661 ntBASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms