Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT6CP48668 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
KRT6CP48668 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT6CP48668 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.05■□□□□ 0.8
KRT6CP48668 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KRT6CP48668 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.05■□□□□ 0.8
KRT6CP48668 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.05■□□□□ 0.8
KRT6CP48668 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
KRT6CP48668 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
KRT6CP48668 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
KRT6CP48668 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KRT6CP48668 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
KRT6CP48668 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT6CP48668 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KRT6CP48668 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
KRT6CP48668 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
KRT6CP48668 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.04■□□□□ 0.8
KRT6CP48668 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT6CP48668 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
KRT6CP48668 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KRT6CP48668 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.04■□□□□ 0.8
KRT6CP48668 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT6CP48668 AC027612.3-201ENST00000413684 1047 ntBASIC20.04■□□□□ 0.8
KRT6CP48668 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.04■□□□□ 0.8
KRT6CP48668 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.04■□□□□ 0.8
KRT6CP48668 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT6CP48668 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT6CP48668 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT6CP48668 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT6CP48668 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
KRT6CP48668 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
KRT6CP48668 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT6CP48668 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KRT6CP48668 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
KRT6CP48668 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KRT6CP48668 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT6CP48668 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT6CP48668 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT6CP48668 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.03■□□□□ 0.8
KRT6CP48668 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KRT6CP48668 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT6CP48668 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.03■□□□□ 0.8
KRT6CP48668 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT6CP48668 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.03■□□□□ 0.8
KRT6CP48668 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT6CP48668 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
KRT6CP48668 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT6CP48668 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT6CP48668 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT6CP48668 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT6CP48668 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT6CP48668 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
KRT6CP48668 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
KRT6CP48668 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
KRT6CP48668 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KRT6CP48668 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.02■□□□□ 0.8
KRT6CP48668 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KRT6CP48668 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT6CP48668 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT6CP48668 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT6CP48668 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
KRT6CP48668 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
KRT6CP48668 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
KRT6CP48668 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
KRT6CP48668 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.02■□□□□ 0.79
KRT6CP48668 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KRT6CP48668 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT6CP48668 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.01■□□□□ 0.79
KRT6CP48668 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT6CP48668 LINC02228-203ENST00000641970 1355 ntBASIC20.01■□□□□ 0.79
KRT6CP48668 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.01■□□□□ 0.79
KRT6CP48668 MIR638-201ENST00000385237 100 ntBASIC20.01■□□□□ 0.79
KRT6CP48668 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.01■□□□□ 0.79
KRT6CP48668 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.01■□□□□ 0.79
KRT6CP48668 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT6CP48668 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.01■□□□□ 0.79
KRT6CP48668 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT6CP48668 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT6CP48668 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
KRT6CP48668 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KRT6CP48668 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
KRT6CP48668 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
KRT6CP48668 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT6CP48668 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20■□□□□ 0.79
KRT6CP48668 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20■□□□□ 0.79
KRT6CP48668 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20■□□□□ 0.79
KRT6CP48668 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
KRT6CP48668 LINC01006-201ENST00000333319 2292 ntBASIC20■□□□□ 0.79
KRT6CP48668 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT6CP48668 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
KRT6CP48668 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT6CP48668 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT6CP48668 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20■□□□□ 0.79
KRT6CP48668 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT6CP48668 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20■□□□□ 0.79
KRT6CP48668 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20■□□□□ 0.79
KRT6CP48668 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20■□□□□ 0.79
KRT6CP48668 AC138907.5-202ENST00000569484 235 ntBASIC20■□□□□ 0.79
KRT6CP48668 AC120498.10-201ENST00000621827 505 ntBASIC20■□□□□ 0.79
KRT6CP48668 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms