Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.05■□□□□ 0.8
SLC6A12P48065 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.05■□□□□ 0.8
SLC6A12P48065 RARRES2P6-201ENST00000567333 442 ntBASIC20.05■□□□□ 0.8
SLC6A12P48065 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.05■□□□□ 0.8
SLC6A12P48065 UBE2DNL-204ENST00000602536 740 ntBASIC20.05■□□□□ 0.8
SLC6A12P48065 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC6A12P48065 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC6A12P48065 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC6A12P48065 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC6A12P48065 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC6A12P48065 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SLC6A12P48065 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A12P48065 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A12P48065 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A12P48065 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.04■□□□□ 0.8
SLC6A12P48065 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.04■□□□□ 0.8
SLC6A12P48065 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC6A12P48065 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.04■□□□□ 0.8
SLC6A12P48065 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A12P48065 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A12P48065 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A12P48065 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A12P48065 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.04■□□□□ 0.8
SLC6A12P48065 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC6A12P48065 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC6A12P48065 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC6A12P48065 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC6A12P48065 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC6A12P48065 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC6A12P48065 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC6A12P48065 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC6A12P48065 KRT18P5-201ENST00000436075 1291 ntBASIC20.03■□□□□ 0.8
SLC6A12P48065 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC6A12P48065 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC6A12P48065 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.03■□□□□ 0.8
SLC6A12P48065 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC6A12P48065 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC6A12P48065 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.03■□□□□ 0.8
SLC6A12P48065 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.03■□□□□ 0.8
SLC6A12P48065 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SLC6A12P48065 AL157384.1-201ENST00000445995 2473 ntBASIC20.03■□□□□ 0.8
SLC6A12P48065 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
SLC6A12P48065 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SLC6A12P48065 FEM1AP1-201ENST00000431297 1995 ntBASIC20.03■□□□□ 0.8
SLC6A12P48065 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC6A12P48065 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLC6A12P48065 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.02■□□□□ 0.8
SLC6A12P48065 AC007225.1-201ENST00000566331 1836 ntBASIC20.02■□□□□ 0.8
SLC6A12P48065 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SLC6A12P48065 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SLC6A12P48065 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.02■□□□□ 0.8
SLC6A12P48065 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.02■□□□□ 0.8
SLC6A12P48065 MYCNOS-205ENST00000641950 531 ntBASIC20.02■□□□□ 0.8
SLC6A12P48065 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.02■□□□□ 0.8
SLC6A12P48065 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLC6A12P48065 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.02■□□□□ 0.8
SLC6A12P48065 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC6A12P48065 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC6A12P48065 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SLC6A12P48065 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SLC6A12P48065 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SLC6A12P48065 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SLC6A12P48065 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SLC6A12P48065 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC6A12P48065 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC6A12P48065 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.01■□□□□ 0.79
SLC6A12P48065 AC091799.1-201ENST00000422823 811 ntBASIC20.01■□□□□ 0.79
SLC6A12P48065 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SLC6A12P48065 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.01■□□□□ 0.79
SLC6A12P48065 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SLC6A12P48065 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.01■□□□□ 0.79
SLC6A12P48065 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC6A12P48065 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.01■□□□□ 0.79
SLC6A12P48065 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC6A12P48065 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
SLC6A12P48065 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20■□□□□ 0.79
SLC6A12P48065 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SLC6A12P48065 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20■□□□□ 0.79
SLC6A12P48065 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20■□□□□ 0.79
SLC6A12P48065 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC6A12P48065 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
SLC6A12P48065 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20■□□□□ 0.79
SLC6A12P48065 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20■□□□□ 0.79
SLC6A12P48065 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SLC6A12P48065 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20■□□□□ 0.79
SLC6A12P48065 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20■□□□□ 0.79
SLC6A12P48065 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC6A12P48065 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20■□□□□ 0.79
SLC6A12P48065 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SLC6A12P48065 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20■□□□□ 0.79
SLC6A12P48065 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC6A12P48065 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SLC6A12P48065 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20■□□□□ 0.79
SLC6A12P48065 AC116050.2-201ENST00000612102 1779 ntBASIC20■□□□□ 0.79
SLC6A12P48065 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20■□□□□ 0.79
SLC6A12P48065 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SLC6A12P48065 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20■□□□□ 0.79
SLC6A12P48065 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.99■□□□□ 0.79
SLC6A12P48065 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.99■□□□□ 0.79
SLC6A12P48065 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms